Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054205
Identifier: 89054205
GI number: 89054205
Start: 1696556
End: 1697014
Strand: Reverse
Name: 89054205
Synonym: Jann_1714
Alternate gene names: NA
Gene position: 1697014-1696556 (Counterclockwise)
Preceding gene: 89054206
Following gene: 89054203
Centisome position: 39.3
GC content: 63.62
Gene sequence:
>459_bases ATGACTAAGATCCTCATCGCCGCCAATATCTGCCTGTTGATCGCCTTCCCCGTCTCCTGGGCCGCGCCGCTGATGCGGGC GGGTCTGTTGCCGCTGTTTGGTCTGTCGGAGATCTCGGTCCTCTCGGGCCTGAGCGCGCTTTGGGGCGATGCGGAATATG CGCTGGCGGCGCTCGTCGCCCTCTTTGCGCTGGTCTCTCCGATGGTCAAAACCATCGTTCTGACCCTGATCCACCTGTCG AAAGCCCCTGTCCGCCTGCTGCCTGCGCTGGAGATCGCGGGCAAGCTGGCGATGGCGGATGTGTTCCTGATCGCGGTCTA TATCACGCTGGCCAAGGGGCTATCCGTGGGCCGGGTCGAGACGGCCTGGGGGCTGTGGCTGTTCACCGGCTGTGTGCTGG TCTCTCTGGTGATCTCGATCCTGACCAAACGCGCGCTCACGCCCCGTGCTCAAGGTTGA
Upstream 100 bases:
>100_bases AAAAGTTGCAAGGCGGGCTGGCCCCCACCTTCCTGGCAAAAGACGTGCGGCTCTGCCGCTCCGCTTGTATGCGGCGCAAT ACTGGCCCAAGACATCGCCC
Downstream 100 bases:
>100_bases GCAAGGACTTAACCACTTACAGCAAAACGACAAAAAGGTTAACGACCCCCACCGTTAACCTTTTTGATCAGAACCGGAAC GCCACCCGCAGCGCGCCCGA
Product: paraquat-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTKILIAANICLLIAFPVSWAAPLMRAGLLPLFGLSEISVLSGLSALWGDAEYALAALVALFALVSPMVKTIVLTLIHLS KAPVRLLPALEIAGKLAMADVFLIAVYITLAKGLSVGRVETAWGLWLFTGCVLVSLVISILTKRALTPRAQG
Sequences:
>Translated_152_residues MTKILIAANICLLIAFPVSWAAPLMRAGLLPLFGLSEISVLSGLSALWGDAEYALAALVALFALVSPMVKTIVLTLIHLS KAPVRLLPALEIAGKLAMADVFLIAVYITLAKGLSVGRVETAWGLWLFTGCVLVSLVISILTKRALTPRAQG >Mature_151_residues TKILIAANICLLIAFPVSWAAPLMRAGLLPLFGLSEISVLSGLSALWGDAEYALAALVALFALVSPMVKTIVLTLIHLSK APVRLLPALEIAGKLAMADVFLIAVYITLAKGLSVGRVETAWGLWLFTGCVLVSLVISILTKRALTPRAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16051; Mature: 15920
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILIAANICLLIAFPVSWAAPLMRAGLLPLFGLSEISVLSGLSALWGDAEYALAALVA CCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LFALVSPMVKTIVLTLIHLSKAPVRLLPALEIAGKLAMADVFLIAVYITLAKGLSVGRVE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TAWGLWLFTGCVLVSLVISILTKRALTPRAQG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKILIAANICLLIAFPVSWAAPLMRAGLLPLFGLSEISVLSGLSALWGDAEYALAALVA CEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH LFALVSPMVKTIVLTLIHLSKAPVRLLPALEIAGKLAMADVFLIAVYITLAKGLSVGRVE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TAWGLWLFTGCVLVSLVISILTKRALTPRAQG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA