Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054200
Identifier: 89054200
GI number: 89054200
Start: 1691139
End: 1691393
Strand: Reverse
Name: 89054200
Synonym: Jann_1709
Alternate gene names: NA
Gene position: 1691393-1691139 (Counterclockwise)
Preceding gene: 89054202
Following gene: 89054198
Centisome position: 39.17
GC content: 68.24
Gene sequence:
>255_bases GTGCCACCCTGGGGCTGCATCCAGCGAAAGGACAATCCCGTGACCGACCCGATCAAAACCCGCCCCGATGGCTCCATCGA CACGCAATTCTACATGGCGCGCGGACGACAGGCCCGCAGCGACGCGGCCCGCGATATGGTGCGATATGTCGCCCCGTCCG CCGAACGGCGCGCGGCGGCTCGGTCCAGACGCGCCCTGGTGCCGGTCTGCGCCGTGGTTGTTGCCATTGTGGCGCTGGCC CCATCGTGGATCTGA
Upstream 100 bases:
>100_bases AAATCGGCAGGCATCTCAAGGGGATTGGGGGATCTTGGGCAAATCCCAAGGCTCTCTTGAGGAGATCACAAGGGCGTCTT CAAGCGTGGCGTGACGGCCC
Downstream 100 bases:
>100_bases GCGCCGGGCCCACCTACCGCCTGCCGAAGGTGACACTCATCCCCGCCAACAGCAGAACCGCCGCGCCGCCTGCATACATC CACAGACCTGCGCGCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPPWGCIQRKDNPVTDPIKTRPDGSIDTQFYMARGRQARSDAARDMVRYVAPSAERRAAARSRRALVPVCAVVVAIVALA PSWI
Sequences:
>Translated_84_residues MPPWGCIQRKDNPVTDPIKTRPDGSIDTQFYMARGRQARSDAARDMVRYVAPSAERRAAARSRRALVPVCAVVVAIVALA PSWI >Mature_83_residues PPWGCIQRKDNPVTDPIKTRPDGSIDTQFYMARGRQARSDAARDMVRYVAPSAERRAAARSRRALVPVCAVVVAIVALAP SWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9279; Mature: 9148
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPWGCIQRKDNPVTDPIKTRPDGSIDTQFYMARGRQARSDAARDMVRYVAPSAERRAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH RSRRALVPVCAVVVAIVALAPSWI HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PPWGCIQRKDNPVTDPIKTRPDGSIDTQFYMARGRQARSDAARDMVRYVAPSAERRAAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH RSRRALVPVCAVVVAIVALAPSWI HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA