Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054197
Identifier: 89054197
GI number: 89054197
Start: 1688412
End: 1689023
Strand: Reverse
Name: 89054197
Synonym: Jann_1706
Alternate gene names: NA
Gene position: 1689023-1688412 (Counterclockwise)
Preceding gene: 89054198
Following gene: 89054194
Centisome position: 39.12
GC content: 62.91
Gene sequence:
>612_bases ATGATCGGCAAATTGTTCCGCCGCGCCAAAGTCGCCCCGGAGATCCCCGAAGACGAGTTGGCCCGCCGCCTGATCGACCC TGATTTCATCGTCGCATCCGGCGGCCGGGAGGTCAGCGCCGCGAAAGCCGTCTGGCCCGAGGCCCCGTTCAGTTGGAAAA ACCCGCCCGAGCCCGATGACGACAGCGTCTATGATCTGGGCGGTACGGTGATCTTCACCCACAATTACGCGCGGCGCGAC GGCGAAAGCCTGCTGCGGGCGTATCTGCCGATTCCCGTCAAGGGTACCGAAGGGTCAGTGTTTCTGGGCGTCTGGTGCAG CCTGAAGACCGGCATGCATGCCCGCTTTCGCAATGCCCAGGGGCGGGGCGATGCCGAGAAGCTGGGGGAGTTGAATTCCT GGCTCTACACCCAATTGCCTCGCTTCACGGGGCCGTTGCTGACCGAGGGCGTCGTGGTTCCCTATCCCGGCGGGCATACG CCGCTTTACTGGATCACAACGCCGAAGCACCCCTTCCACGCCGCACAGCAGGAGGGGCTTCGGGCTTCGGAGATCCTTGA GATCTATGACAGTTTCGGCCACAGCGATGTGATCGCGCATCTCAAGGCTTAA
Upstream 100 bases:
>100_bases CGGCGCAGCCTGCCTATTGCGATGCGTGTTTTTCGGGCGAGTATCCCGTCAGCCCAACCGACCAGATCGCGAAAGGGTTC CAACTGGTGGAGGCGGCTGA
Downstream 100 bases:
>100_bases GGCATCTCAACTGCCGACAAAGCGCAGGATCAGGCGGTCATCGCCGGCCTCCGTGCGGATCACGGCATAGAGCGGATCAA TCCGCCCAAGCAGATCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIGKLFRRAKVAPEIPEDELARRLIDPDFIVASGGREVSAAKAVWPEAPFSWKNPPEPDDDSVYDLGGTVIFTHNYARRD GESLLRAYLPIPVKGTEGSVFLGVWCSLKTGMHARFRNAQGRGDAEKLGELNSWLYTQLPRFTGPLLTEGVVVPYPGGHT PLYWITTPKHPFHAAQQEGLRASEILEIYDSFGHSDVIAHLKA
Sequences:
>Translated_203_residues MIGKLFRRAKVAPEIPEDELARRLIDPDFIVASGGREVSAAKAVWPEAPFSWKNPPEPDDDSVYDLGGTVIFTHNYARRD GESLLRAYLPIPVKGTEGSVFLGVWCSLKTGMHARFRNAQGRGDAEKLGELNSWLYTQLPRFTGPLLTEGVVVPYPGGHT PLYWITTPKHPFHAAQQEGLRASEILEIYDSFGHSDVIAHLKA >Mature_203_residues MIGKLFRRAKVAPEIPEDELARRLIDPDFIVASGGREVSAAKAVWPEAPFSWKNPPEPDDDSVYDLGGTVIFTHNYARRD GESLLRAYLPIPVKGTEGSVFLGVWCSLKTGMHARFRNAQGRGDAEKLGELNSWLYTQLPRFTGPLLTEGVVVPYPGGHT PLYWITTPKHPFHAAQQEGLRASEILEIYDSFGHSDVIAHLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22522; Mature: 22522
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGKLFRRAKVAPEIPEDELARRLIDPDFIVASGGREVSAAKAVWPEAPFSWKNPPEPDD CCHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC DSVYDLGGTVIFTHNYARRDGESLLRAYLPIPVKGTEGSVFLGVWCSLKTGMHARFRNAQ CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHCCCC GRGDAEKLGELNSWLYTQLPRFTGPLLTEGVVVPYPGGHTPLYWITTPKHPFHAAQQEGL CCCCHHHHHHHHHHHHHHCCHHCCCHHHCCEEEECCCCCCCEEEEECCCCCCHHHHHCCC RASEILEIYDSFGHSDVIAHLKA CHHHHHHHHHHCCCCHHHHEECC >Mature Secondary Structure MIGKLFRRAKVAPEIPEDELARRLIDPDFIVASGGREVSAAKAVWPEAPFSWKNPPEPDD CCHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC DSVYDLGGTVIFTHNYARRDGESLLRAYLPIPVKGTEGSVFLGVWCSLKTGMHARFRNAQ CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEECCCCCHHHHCCCC GRGDAEKLGELNSWLYTQLPRFTGPLLTEGVVVPYPGGHTPLYWITTPKHPFHAAQQEGL CCCCHHHHHHHHHHHHHHCCHHCCCHHHCCEEEECCCCCCCEEEEECCCCCCHHHHHCCC RASEILEIYDSFGHSDVIAHLKA CHHHHHHHHHHCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA