Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054183
Identifier: 89054183
GI number: 89054183
Start: 1674990
End: 1675304
Strand: Reverse
Name: 89054183
Synonym: Jann_1692
Alternate gene names: NA
Gene position: 1675304-1674990 (Counterclockwise)
Preceding gene: 89054184
Following gene: 89054182
Centisome position: 38.8
GC content: 62.22
Gene sequence:
>315_bases ATGCGGCCAAGAGGCAGAGACATGTTGCGCACCCTATCCCTGACCCGGGCCATCATGCCGGGCATCCTGTTCCTTGTGGG CGTCTACTTCACCTTTGCCGCCGTGCAGGGCAATAACGGGTTGTTCCAGCGCATTCAGGTGGAGGCCGAGCGCGACCGCC TGGTCGAAGAACTCGCCCGCCTTGAGATGCAGACCGCCCGGATGGAGATCCTGACGCGCCGTCTGTCCGATGATTACCTG GATCTGGATCTGCTGGATGAGCGGGTCCGCAACGTCTTGGGTTACGCGCGCCCCGATGAAGTGATCCTGCCCTAG
Upstream 100 bases:
>100_bases AACGGATGCCCATCCCCCACTAGATGTGGGGGATTCCCAAACCCTCGCAGATGTGCGAATCTCTCTCTCACGCGCCCGCC AGAGGCGTGACAGCAAGGCC
Downstream 100 bases:
>100_bases CGGTCCCTCGCCCCCTACAATTACCCCATGGAAACAAGGCCGTCACCCCGCGCATGGCGGGTCTGTGCCCCTGCGTCAGC TTTACCGGAAGACTCTTTGC
Product: septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MRPRGRDMLRTLSLTRAIMPGILFLVGVYFTFAAVQGNNGLFQRIQVEAERDRLVEELARLEMQTARMEILTRRLSDDYL DLDLLDERVRNVLGYARPDEVILP
Sequences:
>Translated_104_residues MRPRGRDMLRTLSLTRAIMPGILFLVGVYFTFAAVQGNNGLFQRIQVEAERDRLVEELARLEMQTARMEILTRRLSDDYL DLDLLDERVRNVLGYARPDEVILP >Mature_104_residues MRPRGRDMLRTLSLTRAIMPGILFLVGVYFTFAAVQGNNGLFQRIQVEAERDRLVEELARLEMQTARMEILTRRLSDDYL DLDLLDERVRNVLGYARPDEVILP
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12094; Mature: 12094
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRGRDMLRTLSLTRAIMPGILFLVGVYFTFAAVQGNNGLFQRIQVEAERDRLVEELAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LEMQTARMEILTRRLSDDYLDLDLLDERVRNVLGYARPDEVILP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRPRGRDMLRTLSLTRAIMPGILFLVGVYFTFAAVQGNNGLFQRIQVEAERDRLVEELAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LEMQTARMEILTRRLSDDYLDLDLLDERVRNVLGYARPDEVILP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA