Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054180
Identifier: 89054180
GI number: 89054180
Start: 1672138
End: 1672386
Strand: Reverse
Name: 89054180
Synonym: Jann_1689
Alternate gene names: NA
Gene position: 1672386-1672138 (Counterclockwise)
Preceding gene: 89054181
Following gene: 89054179
Centisome position: 38.73
GC content: 61.85
Gene sequence:
>249_bases ATGCGTATCCTAGGCAAAAACGGCTCCGCCGACGCCTACCGCGTCTCCGTCGATCTCGGCGGGGATGGGGTGGTGGCGCT GGTCCCCGATGCCCTTTTGTCGCAGCAATACGGCGTGGACACCAAGGTCAGCCACGATCAGGCCTATGAGTGGATTGCCA CCCAGCAACACGACCTGTCCGACGCCATCAAGGCCTTGAAAAAAGGCGCCACGCCCCGCGCGCCCTTCACCCATATCACG CTCGAATAA
Upstream 100 bases:
>100_bases GCAAGGACGTGCCCATGCCTTACGCGGCCAACCTGGAACGCCACGCGCTGATCACGACGGATGAAGTCGTGGACGCGGTC AAACAGGTCACCTACCGCTG
Downstream 100 bases:
>100_bases GCGATACCCTCTTCAAGGGAGACGATCCAAATGCCCATCGAACTTCTCATGCCCGCCCTCTCCCCCACGATGGAGGAAGG CACCCTGGCGAAATGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRILGKNGSADAYRVSVDLGGDGVVALVPDALLSQQYGVDTKVSHDQAYEWIATQQHDLSDAIKALKKGATPRAPFTHIT LE
Sequences:
>Translated_82_residues MRILGKNGSADAYRVSVDLGGDGVVALVPDALLSQQYGVDTKVSHDQAYEWIATQQHDLSDAIKALKKGATPRAPFTHIT LE >Mature_82_residues MRILGKNGSADAYRVSVDLGGDGVVALVPDALLSQQYGVDTKVSHDQAYEWIATQQHDLSDAIKALKKGATPRAPFTHIT LE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8821; Mature: 8821
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILGKNGSADAYRVSVDLGGDGVVALVPDALLSQQYGVDTKVSHDQAYEWIATQQHDLS CEEECCCCCCCEEEEEEEECCCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHH DAIKALKKGATPRAPFTHITLE HHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure MRILGKNGSADAYRVSVDLGGDGVVALVPDALLSQQYGVDTKVSHDQAYEWIATQQHDLS CEEECCCCCCCEEEEEEEECCCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHH DAIKALKKGATPRAPFTHITLE HHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA