BacMap

Definition	Jannaschia sp. CCS1 chromosome, complete genome.
Accession	NC_007802
Length	4,317,977

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The map label for this gene is fabG [H]

Identifier: 89053813

GI number: 89053813

Start: 1286131

End: 1286820

Strand: Direct

Name: fabG [H]

Synonym: Jann_1322

Alternate gene names: 89053813

Gene position: 1286131-1286820 (Clockwise)

Preceding gene: 89053812

Following gene: 89053814

Centisome position: 29.79

GC content: 64.06

Gene sequence:

>690_bases
ATGCCCCGCCCCCGTATCGCCCTGATCACCGGCGCAAACCGTGGCATTGGCCGCGAGGTTGCCCGGCAATTGGCCCAAGA
TCACGGCCTGCACGTTCTGCTCGGCTCCCGTGACCTCATCAAAGGAGAAGAAGCTGCACGTGAACGACCCAACGCCCGTG
CCATCCAATTGGACGTGGCCGACCCGAAATCGGTGGCCCGCGCATTTGAGCAGATCAGCCAGGAGGTCGGGCGGCTTGAT
GTGCTGGTGAACAATGCCGGCATCGACTATGACACCGACCAACGCGCCAGCATCGCTGACCTGACCCGCGTCCGGCGCGC
GTTTGACACGAACCTGTTCGGCGCGTGGGATGTGGCGATTGCCGCTACACCGCTACTGAAAAAGGGCCTGTCTCCTCGCC
TTGTCAACGTCTCCTCCGGTGCGGGGGCGCTGACCGGCATGGGCGGGGGAACAGCGAGCTACGGTATCTCAAAGGCTGCG
CTCAACGCCCTGACGATCAAGCTGGCAGCGGAGTTGCGAAGCGACCGCGTCCTCGTGAACGCCGTCTGTCCGGGTTGGGT
CGCAACAGACATGGGTGGTGGGGGTCGACCGATCCCCGAGGGTGCAAAAGGCGTCGTCTGGGCCGCAACATTGCCCGACA
CGGGACCAACAGGCGGCTTCTTCCGCGATGGGAACCGGATCGATTGGTGA

Upstream 100 bases:

>100_bases
CGCGGTCAACCACGACGATGCCGTGGCAGACGCCGCTTAAGCCAACCGGGTGGTCCCGTCGCCGGGACTACCTGTCACTT
ACCACCCGAAGGAGATTATC

Downstream 100 bases:

>100_bases
AAAGGGGATCGCGTTCTTTTCCAAAGCAACCGGCAGGCAGAACGGCGAGGTCACGAACGGGGCCTCGCGCTTCTTTTCTT
GACGGCAGAGGAGCCTCTTA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MPRPRIALITGANRGIGREVARQLAQDHGLHVLLGSRDLIKGEEAARERPNARAIQLDVADPKSVARAFEQISQEVGRLD
VLVNNAGIDYDTDQRASIADLTRVRRAFDTNLFGAWDVAIAATPLLKKGLSPRLVNVSSGAGALTGMGGGTASYGISKAA
LNALTIKLAAELRSDRVLVNAVCPGWVATDMGGGGRPIPEGAKGVVWAATLPDTGPTGGFFRDGNRIDW

Sequences:

>Translated_229_residues
MPRPRIALITGANRGIGREVARQLAQDHGLHVLLGSRDLIKGEEAARERPNARAIQLDVADPKSVARAFEQISQEVGRLD
VLVNNAGIDYDTDQRASIADLTRVRRAFDTNLFGAWDVAIAATPLLKKGLSPRLVNVSSGAGALTGMGGGTASYGISKAA
LNALTIKLAAELRSDRVLVNAVCPGWVATDMGGGGRPIPEGAKGVVWAATLPDTGPTGGFFRDGNRIDW
>Mature_228_residues
PRPRIALITGANRGIGREVARQLAQDHGLHVLLGSRDLIKGEEAARERPNARAIQLDVADPKSVARAFEQISQEVGRLDV
LVNNAGIDYDTDQRASIADLTRVRRAFDTNLFGAWDVAIAATPLLKKGLSPRLVNVSSGAGALTGMGGGTASYGISKAAL
NALTIKLAAELRSDRVLVNAVCPGWVATDMGGGGRPIPEGAKGVVWAATLPDTGPTGGFFRDGNRIDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4502599, Length=280, Percent_Identity=30.7142857142857, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI4502601, Length=276, Percent_Identity=30.7971014492754, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI7657478, Length=228, Percent_Identity=35.5263157894737, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI40254992, Length=191, Percent_Identity=31.9371727748691, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI150247226, Length=223, Percent_Identity=31.8385650224215, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI40548397, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI214010158, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI214010156, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI22758144, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI225579078, Length=209, Percent_Identity=29.1866028708134, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI186928839, Length=209, Percent_Identity=33.0143540669856, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI166795268, Length=208, Percent_Identity=31.25, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI7705925, Length=221, Percent_Identity=32.1266968325792, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI10190704, Length=192, Percent_Identity=27.6041666666667, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI10190746, Length=268, Percent_Identity=29.4776119402985, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI4504503, Length=201, Percent_Identity=30.3482587064677, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87082100, Length=192, Percent_Identity=38.0208333333333, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1787335, Length=194, Percent_Identity=34.5360824742268, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1788459, Length=197, Percent_Identity=35.5329949238579, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=33.1983805668016, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI87082160, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193207563, Length=244, Percent_Identity=30.327868852459, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI72001658, Length=211, Percent_Identity=33.175355450237, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17558994, Length=243, Percent_Identity=30.0411522633745, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17559962, Length=211, Percent_Identity=31.7535545023697, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17558990, Length=243, Percent_Identity=30.8641975308642, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17559964, Length=209, Percent_Identity=30.622009569378, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17532177, Length=212, Percent_Identity=31.1320754716981, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17558996, Length=245, Percent_Identity=29.3877551020408, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17558992, Length=245, Percent_Identity=30.2040816326531, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17542178, Length=247, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17541382, Length=245, Percent_Identity=29.7959183673469, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=207, Percent_Identity=32.3671497584541, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=201, Percent_Identity=34.8258706467662, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=28.6458333333333, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=191, Percent_Identity=27.2251308900524, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=228, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=203, Percent_Identity=32.512315270936, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=193, Percent_Identity=27.4611398963731, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=236, Percent_Identity=30.5084745762712, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322227, Length=196, Percent_Identity=32.6530612244898, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24640547, Length=251, Percent_Identity=31.4741035856574, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI23397609, Length=195, Percent_Identity=34.3589743589744, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28571526, Length=198, Percent_Identity=33.8383838383838, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24644339, Length=197, Percent_Identity=33.502538071066, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355319, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24643142, Length=200, Percent_Identity=32.5, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=33.1658291457286, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=26.1780104712042, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28571387, Length=202, Percent_Identity=31.1881188118812, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24665243, Length=199, Percent_Identity=32.1608040201005, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221331218, Length=199, Percent_Identity=32.1608040201005, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24586328, Length=203, Percent_Identity=30.5418719211823, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17737361, Length=205, Percent_Identity=28.780487804878, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 24114; Mature: 23983

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPRIALITGANRGIGREVARQLAQDHGLHVLLGSRDLIKGEEAARERPNARAIQLDVA
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECC
DPKSVARAFEQISQEVGRLDVLVNNAGIDYDTDQRASIADLTRVRRAFDTNLFGAWDVAI
CHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
AATPLLKKGLSPRLVNVSSGAGALTGMGGGTASYGISKAALNALTIKLAAELRSDRVLVN
HHHHHHHCCCCCEEEEECCCCCCEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEE
AVCPGWVATDMGGGGRPIPEGAKGVVWAATLPDTGPTGGFFRDGNRIDW
EECCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
PRPRIALITGANRGIGREVARQLAQDHGLHVLLGSRDLIKGEEAARERPNARAIQLDVA
CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECC
DPKSVARAFEQISQEVGRLDVLVNNAGIDYDTDQRASIADLTRVRRAFDTNLFGAWDVAI
CHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
AATPLLKKGLSPRLVNVSSGAGALTGMGGGTASYGISKAALNALTIKLAAELRSDRVLVN
HHHHHHHCCCCCEEEEECCCCCCEECCCCCCHHHCHHHHHHHHHHHHHHHHHCCCEEEEE
AVCPGWVATDMGGGGRPIPEGAKGVVWAATLPDTGPTGGFFRDGNRIDW
EECCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA