Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053791
Identifier: 89053791
GI number: 89053791
Start: 1258612
End: 1259130
Strand: Direct
Name: 89053791
Synonym: Jann_1300
Alternate gene names: NA
Gene position: 1258612-1259130 (Clockwise)
Preceding gene: 89053782
Following gene: 89053799
Centisome position: 29.15
GC content: 54.72
Gene sequence:
>519_bases ATGGAGAAAGCTATGAAGAAAAATGTAATCACTGCGGCGGCACTGATGACGACAATCGCAGCGTCCTCTAGCGCCATTGC GCAGGACCGATCCCCTATCGAAACACAAAACGTGGAAACCGTGTTGAGGTTATTTGACGAGGGCTGGGGTGCCCAGGACG GTTGGCGTGACGTCTGGAGAGAGACGATGACGCCGGGATTCCGGTCAATTTTCCACTCCAATCAAGCCGTCGAGGGCATT GAGCAGGCTATCGCGTTTAACGCAGTTCTATTTGAGGGTTTCCCTAGGCTAGAAGTAGTAGTCGAGAATGTTACGGTTGA GGGCGACAACGTTGTTGTGCAAGCGCGCCTGACAGGTGCGCAGGACGGACCGTTCTTGGGCGTGCCACCCTCTGGCCAAA TGGTGGATGTACCAGACGTCACACTCTTCACGCTCGCCGACGGTCAGGTTATCGAGATGCGTTACTTCACCGATTTACTC GCCGTCATGACGGCGATCAGTGCGCCTCCAGAGAACTAA
Upstream 100 bases:
>100_bases GACTTGCTCGCTTGGCCGTTTGGTTCTGATTTTTGCGGCTCCATACAGTATGTATTGACCGCCATAATCAAATCGTCAAG AACTAGTCCATACACACTGT
Downstream 100 bases:
>100_bases AATAGTTCGTCGTACCTCATCTAAGCAAAGCGGACGTTGGTAATCAGCTATCCAGTGTCCGCTTGGTCCCGCACAGCCGA TCCTGAAAGCCAATCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MEKAMKKNVITAAALMTTIAASSSAIAQDRSPIETQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGI EQAIAFNAVLFEGFPRLEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTDLL AVMTAISAPPEN
Sequences:
>Translated_172_residues MEKAMKKNVITAAALMTTIAASSSAIAQDRSPIETQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGI EQAIAFNAVLFEGFPRLEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTDLL AVMTAISAPPEN >Mature_172_residues MEKAMKKNVITAAALMTTIAASSSAIAQDRSPIETQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGI EQAIAFNAVLFEGFPRLEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTDLL AVMTAISAPPEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18701; Mature: 18701
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAMKKNVITAAALMTTIAASSSAIAQDRSPIETQNVETVLRLFDEGWGAQDGWRDVWR CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH ETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFPRLEVVVENVTVEGDNVVVQARLTGA HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEECCC QDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTDLLAVMTAISAPPEN CCCCEECCCCCCCEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEKAMKKNVITAAALMTTIAASSSAIAQDRSPIETQNVETVLRLFDEGWGAQDGWRDVWR CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH ETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFPRLEVVVENVTVEGDNVVVQARLTGA HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEECCC QDGPFLGVPPSGQMVDVPDVTLFTLADGQVIEMRYFTDLLAVMTAISAPPEN CCCCEECCCCCCCEEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA