Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053669
Identifier: 89053669
GI number: 89053669
Start: 1141745
End: 1141993
Strand: Direct
Name: 89053669
Synonym: Jann_1178
Alternate gene names: NA
Gene position: 1141745-1141993 (Clockwise)
Preceding gene: 89053668
Following gene: 89053670
Centisome position: 26.44
GC content: 63.05
Gene sequence:
>249_bases ATGACCAAACGCCAAACCATCTCGGACGCCGAACATCGCCGCGTGCGCCAGATCAGGCGCGCCGCGATTGTGATGGCCGT CACCATGGTCGTCTGGATGGGTGCGCAATATCTGGGTGGCCAGATGGGCTGGCCCGTGCGCTTCGTGTTCCTCTTCGACC TTGCGGCGTTTGCGGCACTGGTATGGGCGCTCGTCGTGACGTATTGGGTGTGGAGAGAGCGCAAGCGCACGCGCGACGAC CAGGGATAA
Upstream 100 bases:
>100_bases AGGTCGAGGGCGGCGACGTCTACTGACAGCGCAAAACGCGCTCTGCGGCCAAGGCGCGCAGCCCCTCCCACACGGGGGGC GGCTGGCGTAGGTTAGACCC
Downstream 100 bases:
>100_bases GACGCCATGTTGCAGGACAAAGACCGGATCTTCACCAATATCTACGGCATGCACGACCGGTCCCTGGCCGGTGCCAAGCA GCGTGGCCATTGGGATGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: URF1 [H]
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTKRQTISDAEHRRVRQIRRAAIVMAVTMVVWMGAQYLGGQMGWPVRFVFLFDLAAFAALVWALVVTYWVWRERKRTRDD QG
Sequences:
>Translated_82_residues MTKRQTISDAEHRRVRQIRRAAIVMAVTMVVWMGAQYLGGQMGWPVRFVFLFDLAAFAALVWALVVTYWVWRERKRTRDD QG >Mature_81_residues TKRQTISDAEHRRVRQIRRAAIVMAVTMVVWMGAQYLGGQMGWPVRFVFLFDLAAFAALVWALVVTYWVWRERKRTRDDQ G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9673; Mature: 9541
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRQTISDAEHRRVRQIRRAAIVMAVTMVVWMGAQYLGGQMGWPVRFVFLFDLAAFAAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VWALVVTYWVWRERKRTRDDQG HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TKRQTISDAEHRRVRQIRRAAIVMAVTMVVWMGAQYLGGQMGWPVRFVFLFDLAAFAAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VWALVVTYWVWRERKRTRDDQG HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1909571 [H]