Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053660

Identifier: 89053660

GI number: 89053660

Start: 1133632

End: 1134579

Strand: Direct

Name: 89053660

Synonym: Jann_1169

Alternate gene names: NA

Gene position: 1133632-1134579 (Clockwise)

Preceding gene: 89053658

Following gene: 89053661

Centisome position: 26.25

GC content: 57.59

Gene sequence:

>948_bases
ATGACCGACCTTGCCAATGAACGCCGCATGGTAGTGGCCGGGATCGTCACAATCCTACTCACGGTATTCGCCATGGCGCT
GACCGATGCCTTCGTCAAATTTGCCAGCGCGGACATGACACTCTGGCAGATTTATGTTTGCAGGTCGGCCCTGGCTCTTC
CCGTGCTTATCATGCTTGGCAAAGGTCGTGTGCTCCCAAAGGCGTTTAGCTGGGTGGCTCTTCGCAGCCTGGCACTGGTC
GCGATGTATCTTGCGATCTATGCAGCTATCCCGTTGCTTGACCTGTCCGTGATCGCGGCGTCGCTCTACACGGGGCCGTT
GTTTATCGTCCTGCTTTCTGCGGCTTTCCTGCAAGAGAGGGTCACACCGATGCAATGGTTTGCAGTCGGGCTGGGTTTTG
TCGGTGTTTTGTTCGTGGTGCAGCCCAACGGGGCCAACTTCACGAGCCTGTCCTTGATCCCGATCATCGCCGCATTTCTT
TACGCGGTTGCCGCCGTTCTGACGCGGGCAAAATGTGCGACCGAAGCCCCGGCGTCTCTGGCCGTCAGCCTCAATCTCGC
GCTCATACTCTTCGGTGGCGTTGCCAGTCTTTGGTTCTGGGCTGCGCCATTCGCTCACGCGGCCTCATATCCTTTCCTGT
TCGGCACGTGGTCATCCTTCGACATCAGGACAATCGGTATCCTCTTCATTATGGCTGTGCTCATCATCGGCGTCAGCGTG
GGTCTGGCGAAGGCCTACCAGTCCCCCCGTCCGCAAGTCATTGCGACCTTCGACTATGCGTATCTGATCTTTGCGGCGTT
CTGGGGTTTCGTGTTCTTCCGAGAGGTGCCGGACCTCTGGACCGTTGCAGGTATCGTGCTCATTGTCGTGGCGGGCTTCG
TGGTCCTTCTCCAGCCAACGGATACAAGAGCATCCAAACTGGACAAGTTGCCGGACAGCGGGATTTGA

Upstream 100 bases:

>100_bases
GGTTCATTATGTATTTTTTCTAATCATATTAGTCAGATTATACCGGATCGACGTATAATCATAGCTCGGTATGGTGTGGC
GTCCCTAAGGAAGACCGCAG

Downstream 100 bases:

>100_bases
AGTGATTTCGATGTGGGATGGAACACTGCTTGACATGCACACGACCGTGGAAGGTGGTGCAACCGCACCGACTTCGCGCT
CTGTCCTGCAGCTCGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane; Transporter RhaT Family DMT Superfamily; Drug/Metabolite Permease; Transmembrane Protein; Transporter DME Family DMT Superfamily; Transporter RhaT Family DMT Superfamily Protein; Transmembrane Transporter; Transporter RarD Family DMT Superfamily; RarD Family Protein; Permeases Of Drug/Metabolite Transporter; DMT Family Permease

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTDLANERRMVVAGIVTILLTVFAMALTDAFVKFASADMTLWQIYVCRSALALPVLIMLGKGRVLPKAFSWVALRSLALV
AMYLAIYAAIPLLDLSVIAASLYTGPLFIVLLSAAFLQERVTPMQWFAVGLGFVGVLFVVQPNGANFTSLSLIPIIAAFL
YAVAAVLTRAKCATEAPASLAVSLNLALILFGGVASLWFWAAPFAHAASYPFLFGTWSSFDIRTIGILFIMAVLIIGVSV
GLAKAYQSPRPQVIATFDYAYLIFAAFWGFVFFREVPDLWTVAGIVLIVVAGFVVLLQPTDTRASKLDKLPDSGI

Sequences:

>Translated_315_residues
MTDLANERRMVVAGIVTILLTVFAMALTDAFVKFASADMTLWQIYVCRSALALPVLIMLGKGRVLPKAFSWVALRSLALV
AMYLAIYAAIPLLDLSVIAASLYTGPLFIVLLSAAFLQERVTPMQWFAVGLGFVGVLFVVQPNGANFTSLSLIPIIAAFL
YAVAAVLTRAKCATEAPASLAVSLNLALILFGGVASLWFWAAPFAHAASYPFLFGTWSSFDIRTIGILFIMAVLIIGVSV
GLAKAYQSPRPQVIATFDYAYLIFAAFWGFVFFREVPDLWTVAGIVLIVVAGFVVLLQPTDTRASKLDKLPDSGI
>Mature_314_residues
TDLANERRMVVAGIVTILLTVFAMALTDAFVKFASADMTLWQIYVCRSALALPVLIMLGKGRVLPKAFSWVALRSLALVA
MYLAIYAAIPLLDLSVIAASLYTGPLFIVLLSAAFLQERVTPMQWFAVGLGFVGVLFVVQPNGANFTSLSLIPIIAAFLY
AVAAVLTRAKCATEAPASLAVSLNLALILFGGVASLWFWAAPFAHAASYPFLFGTWSSFDIRTIGILFIMAVLIIGVSVG
LAKAYQSPRPQVIATFDYAYLIFAAFWGFVFFREVPDLWTVAGIVLIVVAGFVVLLQPTDTRASKLDKLPDSGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33989; Mature: 33858

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLANERRMVVAGIVTILLTVFAMALTDAFVKFASADMTLWQIYVCRSALALPVLIMLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
KGRVLPKAFSWVALRSLALVAMYLAIYAAIPLLDLSVIAASLYTGPLFIVLLSAAFLQER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTPMQWFAVGLGFVGVLFVVQPNGANFTSLSLIPIIAAFLYAVAAVLTRAKCATEAPASL
CCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AVSLNLALILFGGVASLWFWAAPFAHAASYPFLFGTWSSFDIRTIGILFIMAVLIIGVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
GLAKAYQSPRPQVIATFDYAYLIFAAFWGFVFFREVPDLWTVAGIVLIVVAGFVVLLQPT
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC
DTRASKLDKLPDSGI
CHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDLANERRMVVAGIVTILLTVFAMALTDAFVKFASADMTLWQIYVCRSALALPVLIMLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
KGRVLPKAFSWVALRSLALVAMYLAIYAAIPLLDLSVIAASLYTGPLFIVLLSAAFLQER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTPMQWFAVGLGFVGVLFVVQPNGANFTSLSLIPIIAAFLYAVAAVLTRAKCATEAPASL
CCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AVSLNLALILFGGVASLWFWAAPFAHAASYPFLFGTWSSFDIRTIGILFIMAVLIIGVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
GLAKAYQSPRPQVIATFDYAYLIFAAFWGFVFFREVPDLWTVAGIVLIVVAGFVVLLQPT
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC
DTRASKLDKLPDSGI
CHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA