Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is menB [C]
Identifier: 89053641
GI number: 89053641
Start: 1111848
End: 1112630
Strand: Direct
Name: menB [C]
Synonym: Jann_1150
Alternate gene names: 89053641
Gene position: 1111848-1112630 (Clockwise)
Preceding gene: 89053640
Following gene: 89053642
Centisome position: 25.75
GC content: 69.99
Gene sequence:
>783_bases ATGGACACTTTGGATGTAACGGTGGACGCGCGCGGGGTGGCCACTCTGACGCTGAACCGGGTGGACGTGCACAACGCCAT GAACGCCGCGATGATCGCGGAGCTGGCAAATGCGGCCCAACGTTTGGGTCGTGACCCGGCGGTGCGGGTCGTGGTGCTGA CCGGGGCGGGCAAAAGCTTCTGCGCGGGCGGTGATCTGGCCTGGATGCGCGCGCAGATGGCGGCGGACGCGGAGACGCGC GCGAGGGAGGCCCGCGGTCTGGCCGAGATGTTGGGGGCGCTCGACCGTCTGCCCAAGCCGCTGATCGGGCGCATTCAGGG GCAGGCCTTCGGCGGTGGCGTTGGCCTGATGTCGGTCTGCGATGTGGCGGTGGGCGTCAACGGTGCAACATTCGGCCTGA CGGAGGTGCGCCTTGGTCTGATCCCGGCCACCATCGGGCCCTATGTCGTGGCGCGGATGGGGGCTGCGCGGGCGCGGCGG GTGTTCTTCTCGGGCCGCCGCTTCGGCGCGGAGGAGGCGGTGGCGCTTGGCCTGTTGGCCCGCACCGTGCCTGAGGCGGA TCTGGATGCCGCCGTCGAGGCAGAGGTGACGCCGTATCTTGCCGCGGCCCCCGGAGCCGTGGCCGACAGCAAGGCGCTGG TAGCGCGGCTTGGCGGCGGCGTCTCGGACGCGGATATCACCGCCACGATTGACGCCCTTGTGGGCCGTTGGGAAAGCGCG GAAGCCGCCGACGGGATCGCGGCATTCTTCGACAAGCGCAAACCCGGATGGGTCGAGACCTAG
Upstream 100 bases:
>100_bases TGGACGCGCATCTGCGCCGACGCGGGTTCGAGACGGGTCTGGATGCCGATGTGCTGGCCCGGGCCGGGGCTTTGGCGCGC GGTTTGCGGAAGGAATGACG
Downstream 100 bases:
>100_bases GCGGCAACAGGACCCCGCGCCCCGACACTAACGCCCCATCCCTCCGCGCCACGCTCATGGTGCTGCGCTGCGGCGTGGAA CGCGCTGGACAGACGGCGCG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDTLDVTVDARGVATLTLNRVDVHNAMNAAMIAELANAAQRLGRDPAVRVVVLTGAGKSFCAGGDLAWMRAQMAADAETR AREARGLAEMLGALDRLPKPLIGRIQGQAFGGGVGLMSVCDVAVGVNGATFGLTEVRLGLIPATIGPYVVARMGAARARR VFFSGRRFGAEEAVALGLLARTVPEADLDAAVEAEVTPYLAAAPGAVADSKALVARLGGGVSDADITATIDALVGRWESA EAADGIAAFFDKRKPGWVET
Sequences:
>Translated_260_residues MDTLDVTVDARGVATLTLNRVDVHNAMNAAMIAELANAAQRLGRDPAVRVVVLTGAGKSFCAGGDLAWMRAQMAADAETR AREARGLAEMLGALDRLPKPLIGRIQGQAFGGGVGLMSVCDVAVGVNGATFGLTEVRLGLIPATIGPYVVARMGAARARR VFFSGRRFGAEEAVALGLLARTVPEADLDAAVEAEVTPYLAAAPGAVADSKALVARLGGGVSDADITATIDALVGRWESA EAADGIAAFFDKRKPGWVET >Mature_260_residues MDTLDVTVDARGVATLTLNRVDVHNAMNAAMIAELANAAQRLGRDPAVRVVVLTGAGKSFCAGGDLAWMRAQMAADAETR AREARGLAEMLGALDRLPKPLIGRIQGQAFGGGVGLMSVCDVAVGVNGATFGLTEVRLGLIPATIGPYVVARMGAARARR VFFSGRRFGAEEAVALGLLARTVPEADLDAAVEAEVTPYLAAAPGAVADSKALVARLGGGVSDADITATIDALVGRWESA EAADGIAAFFDKRKPGWVET
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI45643119, Length=255, Percent_Identity=27.4509803921569, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI260275230, Length=255, Percent_Identity=27.4509803921569, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI260274832, Length=255, Percent_Identity=27.4509803921569, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI70995211, Length=204, Percent_Identity=30.3921568627451, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI194097323, Length=253, Percent_Identity=30.0395256916996, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=24.901185770751, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI116235487, Length=232, Percent_Identity=22.4137931034483, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI221136756, Length=236, Percent_Identity=24.1525423728814, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221136753, Length=236, Percent_Identity=24.1525423728814, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI221307494, Length=236, Percent_Identity=24.1525423728814, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI68989263, Length=169, Percent_Identity=30.1775147928994, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI25453481, Length=232, Percent_Identity=22.4137931034483, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI51538573, Length=232, Percent_Identity=22.4137931034483, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4757966, Length=192, Percent_Identity=24.4791666666667, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI51538581, Length=192, Percent_Identity=24.4791666666667, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4757968, Length=232, Percent_Identity=22.4137931034483, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI49355787, Length=232, Percent_Identity=22.4137931034483, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI37594471, Length=154, Percent_Identity=30.5194805194805, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI37594469, Length=154, Percent_Identity=30.5194805194805, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4502327, Length=268, Percent_Identity=27.6119402985075, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1788597, Length=251, Percent_Identity=29.4820717131474, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787659, Length=265, Percent_Identity=31.6981132075472, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=31.5384615384615, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI221142681, Length=262, Percent_Identity=29.7709923664122, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=25, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788682, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17536985, Length=185, Percent_Identity=32.972972972973, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI25145438, Length=270, Percent_Identity=29.6296296296296, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17535521, Length=259, Percent_Identity=27.027027027027, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17534483, Length=185, Percent_Identity=28.6486486486486, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17540714, Length=223, Percent_Identity=30.0448430493274, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17554946, Length=258, Percent_Identity=27.1317829457364, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17549921, Length=213, Percent_Identity=26.7605633802817, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560910, Length=179, Percent_Identity=31.2849162011173, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17558304, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25144160, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144157, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508953, Length=122, Percent_Identity=33.6065573770492, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508951, Length=122, Percent_Identity=33.6065573770492, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25144276, Length=122, Percent_Identity=33.6065573770492, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17540306, Length=258, Percent_Identity=25.5813953488372, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI19922422, Length=251, Percent_Identity=26.6932270916335, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI20129971, Length=185, Percent_Identity=31.8918918918919, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24653477, Length=185, Percent_Identity=31.8918918918919, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24653139, Length=258, Percent_Identity=29.0697674418605, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI19920382, Length=203, Percent_Identity=29.064039408867, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI21357171, Length=179, Percent_Identity=26.8156424581006, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 26786; Mature: 26786
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLDVTVDARGVATLTLNRVDVHNAMNAAMIAELANAAQRLGRDPAVRVVVLTGAGKSF CCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC CAGGDLAWMRAQMAADAETRAREARGLAEMLGALDRLPKPLIGRIQGQAFGGGVGLMSVC CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHH DVAVGVNGATFGLTEVRLGLIPATIGPYVVARMGAARARRVFFSGRRFGAEEAVALGLLA HHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RTVPEADLDAAVEAEVTPYLAAAPGAVADSKALVARLGGGVSDADITATIDALVGRWESA HHCCCCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC EAADGIAAFFDKRKPGWVET HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDTLDVTVDARGVATLTLNRVDVHNAMNAAMIAELANAAQRLGRDPAVRVVVLTGAGKSF CCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC CAGGDLAWMRAQMAADAETRAREARGLAEMLGALDRLPKPLIGRIQGQAFGGGVGLMSVC CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHH DVAVGVNGATFGLTEVRLGLIPATIGPYVVARMGAARARRVFFSGRRFGAEEAVALGLLA HHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH RTVPEADLDAAVEAEVTPYLAAAPGAVADSKALVARLGGGVSDADITATIDALVGRWESA HHCCCCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC EAADGIAAFFDKRKPGWVET HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA