Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053634

Identifier: 89053634

GI number: 89053634

Start: 1104473

End: 1104811

Strand: Direct

Name: 89053634

Synonym: Jann_1143

Alternate gene names: NA

Gene position: 1104473-1104811 (Clockwise)

Preceding gene: 89053633

Following gene: 89053636

Centisome position: 25.58

GC content: 66.37

Gene sequence:

>339_bases
GTGTGTCAGTGTCCGTTGGCGGTGGGCGGCGCTGAGATGATGCGCCAGATCGCCTTGCCGCTGGCGTTCCTGCTGGCCGT
GACGGGCGCCATCGGGCTGTATCTGGGCGTGCAATCAGCGCCTGTGAGCGAGAGTGAGATCATCGAGCGTCACGCGGCGG
ACTATGTGACGGAAACAGGCGGGGCGCGGACCGATTGCTATGCCGTGCCCTCAGGCGTCGAAGGCGTGCGGATGATCGTG
ATTTGCGAAGCAGAGGGATCGGAGGCGTGGTTCCGCGCGGTGGATGCAAGGGGCGCGCCGGTCGACGCAGCGCTGGTCTT
TGGGGAGGACGGGACGTGA

Upstream 100 bases:

>100_bases
CTGAAATCCGGCGGATGCTGGTCGGGCGCGAATTGATGGGGATGATGTGAGGTTTGGCTGAGGTCGGATTGCGTTCTCCT
GGCAAGATGAACGGGGGGCT

Downstream 100 bases:

>100_bases
GGATGATTTGGGCCCTCGTGGTGGCGATCTGGCCGGGGATTGGGGCGGCGCAGAGCTGGGGCGACGGCGCGTCTGACACG
CCGCGGTTTGAAGTATGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MCQCPLAVGGAEMMRQIALPLAFLLAVTGAIGLYLGVQSAPVSESEIIERHAADYVTETGGARTDCYAVPSGVEGVRMIV
ICEAEGSEAWFRAVDARGAPVDAALVFGEDGT

Sequences:

>Translated_112_residues
MCQCPLAVGGAEMMRQIALPLAFLLAVTGAIGLYLGVQSAPVSESEIIERHAADYVTETGGARTDCYAVPSGVEGVRMIV
ICEAEGSEAWFRAVDARGAPVDAALVFGEDGT
>Mature_112_residues
MCQCPLAVGGAEMMRQIALPLAFLLAVTGAIGLYLGVQSAPVSESEIIERHAADYVTETGGARTDCYAVPSGVEGVRMIV
ICEAEGSEAWFRAVDARGAPVDAALVFGEDGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11619; Mature: 11619

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQCPLAVGGAEMMRQIALPLAFLLAVTGAIGLYLGVQSAPVSESEIIERHAADYVTETG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
GARTDCYAVPSGVEGVRMIVICEAEGSEAWFRAVDARGAPVDAALVFGEDGT
CCCCEEEECCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MCQCPLAVGGAEMMRQIALPLAFLLAVTGAIGLYLGVQSAPVSESEIIERHAADYVTETG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
GARTDCYAVPSGVEGVRMIVICEAEGSEAWFRAVDARGAPVDAALVFGEDGT
CCCCEEEECCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA