Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053596

Identifier: 89053596

GI number: 89053596

Start: 1065889

End: 1066848

Strand: Direct

Name: 89053596

Synonym: Jann_1105

Alternate gene names: NA

Gene position: 1065889-1066848 (Clockwise)

Preceding gene: 89053595

Following gene: 89053597

Centisome position: 24.68

GC content: 65.62

Gene sequence:

>960_bases
GTGCCGCCGGTGAGCGACGCGTTTCAACGAGCAAAAGATGGCGTGGCCGAGGTCCGGGCGTCTGGCCGATTGGGGGGGTG
TGCGGCCGACGGATGTGCGGTGCATCTGGCGCACCCGTTCGAGAGCCTGGATCTGGCCGGGTATCACGGCGTTCTGGATC
AGTTGGCGACGGCCTTCCCGGATCTGGAGCGGCGGGTAACGGTTGAGGTCGCGGGTCGCGATGGCCATGGGCAGCTTTGG
ATCGGGTATTGCGGGTATTGGTGTGGGCGTTTTGATGCGCCGTTTCTGGACATTCCACCGACGCGGCGGATGGCGGCGAT
GCGGTTCCATGATTTTGTCCGGGTGGACGATGGCCGTGTCGTGGAGATGCAGTCCCTGTGGGATCTGCCGGAGTTGATGA
TGCAGGCCGGTGTCTGGCCCTTGTCACCATCGCTCGGGCGCGAATGGCAGGTGCCCGGCCCCGCCACGCAGGACGGGTTG
GCCGTGTCCGGTGATGGAGCGGCGGCGTTGCAGGTCGTGGGCGATATGCTTGGCGGGCTTGGGAATGATCCGGCAGGCAC
GCCCCGCGATGTGATGGCGCGCTTCTGGCATGAGGGATGTTCCTGGTACGGGCCGTCGGGCATCGGAACCGCGCGCGGTA
TTGACGGGTTCCGCAGCCACCATCAGGCGCCGTTTCTGGGCGCCATGCCGGACCGAAGATCCTATGTGGACGCCGGGCAT
TTCTTCGCAGAGGGTGCGTATGTGGGCTTCACGGCGTGGCCTGGGATGGCCTGCACTCTCACCGGCGGCAGCTGGTTGGG
GATCGCGGGCGCGGGTCAGGAGATCACGATGCGGAGCCTCGATTTCTGGCGGGTGGAGGGCGGCAAGATCGCCGAGAACT
GGGTGCTGGTGGATCTGCTTCACGTCTATGACCAACTTGGTGTGGACGTGCTGGCGCGGATGCGGGAGCTTGCGAGATGA

Upstream 100 bases:

>100_bases
GAGTAGGTTTTGGGGGTGGCGGGCCCCGCCCGCCCACCCCTTTTTGTGGGGGCCAGCCCCCACACCCCCGGGATATTTAG
AGAACGGGGAAACAGGGAGA

Downstream 100 bases:

>100_bases
GAGACCTGAACTTGACGAAATGCCTCCAATTCATAGGCTTATCCCCAGAATTTTCCCTAGAGCGTGTGAAAATCGAACCT
TTCCCGGACGGAGCCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MPPVSDAFQRAKDGVAEVRASGRLGGCAADGCAVHLAHPFESLDLAGYHGVLDQLATAFPDLERRVTVEVAGRDGHGQLW
IGYCGYWCGRFDAPFLDIPPTRRMAAMRFHDFVRVDDGRVVEMQSLWDLPELMMQAGVWPLSPSLGREWQVPGPATQDGL
AVSGDGAAALQVVGDMLGGLGNDPAGTPRDVMARFWHEGCSWYGPSGIGTARGIDGFRSHHQAPFLGAMPDRRSYVDAGH
FFAEGAYVGFTAWPGMACTLTGGSWLGIAGAGQEITMRSLDFWRVEGGKIAENWVLVDLLHVYDQLGVDVLARMRELAR

Sequences:

>Translated_319_residues
MPPVSDAFQRAKDGVAEVRASGRLGGCAADGCAVHLAHPFESLDLAGYHGVLDQLATAFPDLERRVTVEVAGRDGHGQLW
IGYCGYWCGRFDAPFLDIPPTRRMAAMRFHDFVRVDDGRVVEMQSLWDLPELMMQAGVWPLSPSLGREWQVPGPATQDGL
AVSGDGAAALQVVGDMLGGLGNDPAGTPRDVMARFWHEGCSWYGPSGIGTARGIDGFRSHHQAPFLGAMPDRRSYVDAGH
FFAEGAYVGFTAWPGMACTLTGGSWLGIAGAGQEITMRSLDFWRVEGGKIAENWVLVDLLHVYDQLGVDVLARMRELAR
>Mature_318_residues
PPVSDAFQRAKDGVAEVRASGRLGGCAADGCAVHLAHPFESLDLAGYHGVLDQLATAFPDLERRVTVEVAGRDGHGQLWI
GYCGYWCGRFDAPFLDIPPTRRMAAMRFHDFVRVDDGRVVEMQSLWDLPELMMQAGVWPLSPSLGREWQVPGPATQDGLA
VSGDGAAALQVVGDMLGGLGNDPAGTPRDVMARFWHEGCSWYGPSGIGTARGIDGFRSHHQAPFLGAMPDRRSYVDAGHF
FAEGAYVGFTAWPGMACTLTGGSWLGIAGAGQEITMRSLDFWRVEGGKIAENWVLVDLLHVYDQLGVDVLARMRELAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34531; Mature: 34399

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVSDAFQRAKDGVAEVRASGRLGGCAADGCAVHLAHPFESLDLAGYHGVLDQLATAFP
CCCHHHHHHHHHCCHHHHHHCCCCCCEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHCC
DLERRVTVEVAGRDGHGQLWIGYCGYWCGRFDAPFLDIPPTRRMAAMRFHDFVRVDDGRV
CCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCE
VEMQSLWDLPELMMQAGVWPLSPSLGREWQVPGPATQDGLAVSGDGAAALQVVGDMLGGL
EEHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHCCC
GNDPAGTPRDVMARFWHEGCSWYGPSGIGTARGIDGFRSHHQAPFLGAMPDRRSYVDAGH
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCH
FFAEGAYVGFTAWPGMACTLTGGSWLGIAGAGQEITMRSLDFWRVEGGKIAENWVLVDLL
HHCCCCEEEEECCCCCEEEECCCCEEEECCCCCEEEEECCEEEEECCCEEEHHHHHHHHH
HVYDQLGVDVLARMRELAR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPVSDAFQRAKDGVAEVRASGRLGGCAADGCAVHLAHPFESLDLAGYHGVLDQLATAFP
CCHHHHHHHHHCCHHHHHHCCCCCCEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHCC
DLERRVTVEVAGRDGHGQLWIGYCGYWCGRFDAPFLDIPPTRRMAAMRFHDFVRVDDGRV
CCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCE
VEMQSLWDLPELMMQAGVWPLSPSLGREWQVPGPATQDGLAVSGDGAAALQVVGDMLGGL
EEHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHCCC
GNDPAGTPRDVMARFWHEGCSWYGPSGIGTARGIDGFRSHHQAPFLGAMPDRRSYVDAGH
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCH
FFAEGAYVGFTAWPGMACTLTGGSWLGIAGAGQEITMRSLDFWRVEGGKIAENWVLVDLL
HHCCCCEEEEECCCCCEEEECCCCEEEECCCCCEEEEECCEEEEECCCEEEHHHHHHHHH
HVYDQLGVDVLARMRELAR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA