Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yfgE [C]

Identifier: 89053548

GI number: 89053548

Start: 1010752

End: 1011453

Strand: Direct

Name: yfgE [C]

Synonym: Jann_1057

Alternate gene names: 89053548

Gene position: 1010752-1011453 (Clockwise)

Preceding gene: 89053547

Following gene: 89053549

Centisome position: 23.41

GC content: 65.95

Gene sequence:

>702_bases
ATGTCCCGTCAGCTGACCTTTGACCTGCCGCTCCGTCCCGCGATGGGGCGAGATGATTTCTTTGTCTCCGCCGCCAATGC
AGGTGCGGTGGCGCAGATCGACGCCTGGGAGGGCTGGCCAACCGCCAAGCTGGTGCTGTGCGGTCCGCCCGCGTCCGGCA
AGACGCATCTGGCCCACGTCTGGGCCGCGACCACGGGGGCGCAGATCGTGCAGGCCACCGATATCGTGTCTCAGATTGAA
AGGCTTTCGACCGCTCCGGCTCTGGTGATCGAAGATGCGGAGGACATCAGCGAGGACGCGCTAGCGGAGGAGGGGATGTT
CCACATCCACAACGCGCTCTCCCATCGTGGTGCGCCCTTGTTGATCACGGCCCGGCTGCCCCCGTCGCGCTGGGGCACGC
AATTGCCGGATCTGGCAAGCCGCATGGCGCAGGCCGGGCTGGCCAGGCTGGAGGCGCCCGACGATGCGCTGTTGATGGCG
GTGATGATGAAGCGCGCTTTTGACCGCAAGCTGCCCCTCTCTCCCAAAATTCTGACATTTGCCGCCCCCCGGCTGGAACG
CTCTTTCGCCGCCGCCGATGCCTTCATCGCCCGCGTTGACGCGCTGGCCCTGAGCGAGAAGCGTAAGCCATCGCTGACCC
ACGCGAAGGCGGCCCTGGCGCAGGCCGCCCTTGGACAATCAGACAGCGATCCGTCATCTTGA

Upstream 100 bases:

>100_bases
TCGTGCGCTATTTCGTGGAACGCTATCAGGAGGGGCTGCTGTATCAGGGTGTTTCGGCGCAGGACGCCCCGCCCGACGAT
AGCCCCAACCCCGACGTCTG

Downstream 100 bases:

>100_bases
CGTCACATCTTGCCAATAGGCCCCGCCCATGAGCTTTGCCGATTTTCTCAACGCCCCCTGTCCCGCCCCGGTCGACCTGC
CCGAGGCGGAATGGACCGGT

Product: chromosomal replication initiator, DnaA

Products: NA

Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; DNAA-Like Protein; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase; ATPase-Like Protein Involved In DNA Replication Initiation; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; DNAA-Like Protein Hda

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIE
RLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMA
VMMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS

Sequences:

>Translated_233_residues
MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIE
RLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMA
VMMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS
>Mature_232_residues
SRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIER
LSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAV
MMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24832; Mature: 24700

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHV
CCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEE
WAATTGAQIVQATDIVSQIERLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPL
EHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCE
LITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAVMMKRAFDRKLPLSPKILTF
EEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
AAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHV
CCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEE
WAATTGAQIVQATDIVSQIERLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPL
EHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCE
LITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAVMMKRAFDRKLPLSPKILTF
EEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE
AAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA