Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yfgE [C]
Identifier: 89053548
GI number: 89053548
Start: 1010752
End: 1011453
Strand: Direct
Name: yfgE [C]
Synonym: Jann_1057
Alternate gene names: 89053548
Gene position: 1010752-1011453 (Clockwise)
Preceding gene: 89053547
Following gene: 89053549
Centisome position: 23.41
GC content: 65.95
Gene sequence:
>702_bases ATGTCCCGTCAGCTGACCTTTGACCTGCCGCTCCGTCCCGCGATGGGGCGAGATGATTTCTTTGTCTCCGCCGCCAATGC AGGTGCGGTGGCGCAGATCGACGCCTGGGAGGGCTGGCCAACCGCCAAGCTGGTGCTGTGCGGTCCGCCCGCGTCCGGCA AGACGCATCTGGCCCACGTCTGGGCCGCGACCACGGGGGCGCAGATCGTGCAGGCCACCGATATCGTGTCTCAGATTGAA AGGCTTTCGACCGCTCCGGCTCTGGTGATCGAAGATGCGGAGGACATCAGCGAGGACGCGCTAGCGGAGGAGGGGATGTT CCACATCCACAACGCGCTCTCCCATCGTGGTGCGCCCTTGTTGATCACGGCCCGGCTGCCCCCGTCGCGCTGGGGCACGC AATTGCCGGATCTGGCAAGCCGCATGGCGCAGGCCGGGCTGGCCAGGCTGGAGGCGCCCGACGATGCGCTGTTGATGGCG GTGATGATGAAGCGCGCTTTTGACCGCAAGCTGCCCCTCTCTCCCAAAATTCTGACATTTGCCGCCCCCCGGCTGGAACG CTCTTTCGCCGCCGCCGATGCCTTCATCGCCCGCGTTGACGCGCTGGCCCTGAGCGAGAAGCGTAAGCCATCGCTGACCC ACGCGAAGGCGGCCCTGGCGCAGGCCGCCCTTGGACAATCAGACAGCGATCCGTCATCTTGA
Upstream 100 bases:
>100_bases TCGTGCGCTATTTCGTGGAACGCTATCAGGAGGGGCTGCTGTATCAGGGTGTTTCGGCGCAGGACGCCCCGCCCGACGAT AGCCCCAACCCCGACGTCTG
Downstream 100 bases:
>100_bases CGTCACATCTTGCCAATAGGCCCCGCCCATGAGCTTTGCCGATTTTCTCAACGCCCCCTGTCCCGCCCCGGTCGACCTGC CCGAGGCGGAATGGACCGGT
Product: chromosomal replication initiator, DnaA
Products: NA
Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; DNAA-Like Protein; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase; ATPase-Like Protein Involved In DNA Replication Initiation; ATPase Involved In DNA Replication Initiation; Chromosomal Replication Initiator DNAa; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; DNAA-Like Protein Hda
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIE RLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMA VMMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS
Sequences:
>Translated_233_residues MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIE RLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMA VMMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS >Mature_232_residues SRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHVWAATTGAQIVQATDIVSQIER LSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPLLITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAV MMKRAFDRKLPLSPKILTFAAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS
Specific function: Unknown
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24832; Mature: 24700
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHV CCCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEE WAATTGAQIVQATDIVSQIERLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPL EHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCE LITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAVMMKRAFDRKLPLSPKILTF EEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE AAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRQLTFDLPLRPAMGRDDFFVSAANAGAVAQIDAWEGWPTAKLVLCGPPASGKTHLAHV CCCEEECCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCEEEEE WAATTGAQIVQATDIVSQIERLSTAPALVIEDAEDISEDALAEEGMFHIHNALSHRGAPL EHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCCE LITARLPPSRWGTQLPDLASRMAQAGLARLEAPDDALLMAVMMKRAFDRKLPLSPKILTF EEEECCCCHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE AAPRLERSFAAADAFIARVDALALSEKRKPSLTHAKAALAQAALGQSDSDPSS ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA