Click here to switch to the map view.

The map label for this gene is chaC [H]

Identifier: 89053529

GI number: 89053529

Start: 991420

End: 991962

Strand: Direct

Name: chaC [H]

Synonym: Jann_1038

Alternate gene names: 89053529

Gene position: 991420-991962 (Clockwise)

Preceding gene: 89053527

Following gene: 89053530

Centisome position: 22.96

GC content: 60.41

Gene sequence:

>543_bases
ATGACCTCGCCGCTTTGGGTATTTGGATACGGATCACTTCTGTGGAACCCGGGGTTTCCCGTGTCCGAGACGCGTATCGC
GCGGCTGCACGATTGGCATCGGTCGTTCTGCATGTCGTCCATCCATCACCGGGGCACGGAGGATGAACCCGGCCTTGTCC
TGGCGCTGGATGCGTCAAGCGGCGCAAGCTGTGATGGCCTTGCCCTGCGGGCCGAACCGGGAACCGAAGACGCCACCATT
GCCTACCTTCGCGAGCGGGAGTTGATATCGTCCGCCTATATCGAGACCCGCCAAAGTGTCACGTTCCACGGCGGTGGTAC
CCAGGATGACGTGCTGACCTACGTCATCAACCGTGATCACGTGCAATATTGTCAACATTCGCTGGACGAACAGGCAAGGA
TCATTGCGGGCGCCGTCGGCGGGCGTGGCCCCAATGACGAATACCTCTACAACACGGCCGCCCATCTGACCGAGTTGGGC
ATCGGCGACGCGGATCTTGAGGCTTTGGTCACCATGGTGCGGGCTTTAACCGCCACAGACTAA

Upstream 100 bases:

>100_bases
CGCGGGACAGACAAGCTGTCTCTGGTCGCGCCCGGCAAATGCGCGGTTCAGGTTACAGATGACCTGCGCTACGACGGCGG
GGCACGATAAGGATGACCGC

Downstream 100 bases:

>100_bases
GGCTTTTGTTGGCGTGCGGCGCTGCATCCGTGTATGGTTGCGCCAGACAAGTCAAAAGAGCGGTTGAGCAAACCCCATGG
CGAGCAGCAGAGAGGGCTCC

Product: ChaC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTSPLWVFGYGSLLWNPGFPVSETRIARLHDWHRSFCMSSIHHRGTEDEPGLVLALDASSGASCDGLALRAEPGTEDATI
AYLRERELISSAYIETRQSVTFHGGGTQDDVLTYVINRDHVQYCQHSLDEQARIIAGAVGGRGPNDEYLYNTAAHLTELG
IGDADLEALVTMVRALTATD

Sequences:

>Translated_180_residues
MTSPLWVFGYGSLLWNPGFPVSETRIARLHDWHRSFCMSSIHHRGTEDEPGLVLALDASSGASCDGLALRAEPGTEDATI
AYLRERELISSAYIETRQSVTFHGGGTQDDVLTYVINRDHVQYCQHSLDEQARIIAGAVGGRGPNDEYLYNTAAHLTELG
IGDADLEALVTMVRALTATD
>Mature_179_residues
TSPLWVFGYGSLLWNPGFPVSETRIARLHDWHRSFCMSSIHHRGTEDEPGLVLALDASSGASCDGLALRAEPGTEDATIA
YLRERELISSAYIETRQSVTFHGGGTQDDVLTYVINRDHVQYCQHSLDEQARIIAGAVGGRGPNDEYLYNTAAHLTELGI
GDADLEALVTMVRALTATD

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI56790287, Length=176, Percent_Identity=32.9545454545455, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI218563698, Length=186, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=4e-12,
Organism=Escherichia coli, GI145693119, Length=178, Percent_Identity=33.1460674157303, Blast_Score=103, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17560078, Length=168, Percent_Identity=34.5238095238095, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24641578, Length=186, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45553467, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649389, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649391, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649393, Length=163, Percent_Identity=31.2883435582822, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 19664; Mature: 19533

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPLWVFGYGSLLWNPGFPVSETRIARLHDWHRSFCMSSIHHRGTEDEPGLVLALDASS
CCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
GASCDGLALRAEPGTEDATIAYLRERELISSAYIETRQSVTFHGGGTQDDVLTYVINRDH
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH
VQYCQHSLDEQARIIAGAVGGRGPNDEYLYNTAAHLTELGIGDADLEALVTMVRALTATD
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSPLWVFGYGSLLWNPGFPVSETRIARLHDWHRSFCMSSIHHRGTEDEPGLVLALDASS
CCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
GASCDGLALRAEPGTEDATIAYLRERELISSAYIETRQSVTFHGGGTQDDVLTYVINRDH
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCHH
VQYCQHSLDEQARIIAGAVGGRGPNDEYLYNTAAHLTELGIGDADLEALVTMVRALTATD
HHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]