Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053527
Identifier: 89053527
GI number: 89053527
Start: 989227
End: 990183
Strand: Direct
Name: 89053527
Synonym: Jann_1036
Alternate gene names: NA
Gene position: 989227-990183 (Clockwise)
Preceding gene: 89053526
Following gene: 89053529
Centisome position: 22.91
GC content: 68.13
Gene sequence:
>957_bases GTGACGCTTCGGACCGCTCTCTGTGCCATGGCGCTGGTCAGTACGATGCCCCTCACGGCGGGGGGGCAGACGGCTGAGGT GCGGGTCATCACGGCGACGGACCTCGCGCCAGCAGGCTCCTTGCGACCCGAAGCCCGGCCCGGGGGCACATCGGTGCCTG AAAGTGTTGGCCCGGGCGCGATTGCCTCTGCGGTGGGTGAGGCCATTGGCTCCGCCCCGGTGGCCGAAGCCCCGGGCCCG ACGCGCCCGCAAGGCCTGGCCGGACTGTTCCGTCCGCGGGGTGAAACGCCTGCCGCGACGGGCGCGGTCAGCGGTGGCTC CTCTCTCGCGGTTGCCGAATCCCTGCGCCCCGAACTGCGCCCCTCCGGCCTGGTCGAGACGGTCCGTGCCGCCGCCACGC GCAATATCCCGTCCGCCGTTGCACAGCCGGGGCGGGACACTGGCACGTTGTGCGGTGTCCTGGGCCTTCAGGGGGAAGAG ATCGCGCCGGTCACGGGCCGTATCAATGGCTGCGGCATCCCGGATGCCGTCCGGTTGCGCATTGTCCATGGCATCACGCT CACCTCACCGGCGACGATCAATTGCACCACGGCCCAGTCGCTCAGCCAATGGGTGCTGGATGCCGAAGATATCATCGGGC GAACGGGCGGTGGCATGACGAACCTGCGCGTCGTGGCCTCCTACGCCTGCCGAACGCGCAACTCCCGCTCGGGGGCGAGG CTGTCGGAGCATGCCACAGGCAACGCTGTGGATATCGCCGGGATCGGGCTGCAAAACGGCAGTGAGCTGAGTGTGCTAAG CGATTGGCGCGGCGGGAATTCTTCGATCATGCGGGGATTGCATGAAGCCGCCTGCGGCACCTTCGGCACCGTCCTTGGCC CGGATTCTGACCGCTTCCACCAGGATCACTTCCACTTCGATGTGGCCTCCTACCGCTCTGGATCTTACTGCCGCTGA
Upstream 100 bases:
>100_bases TCACCCGCACCCGTGCGATCCGGCGCGGGATTATCGAGGCGGGCCAGGATACCGATGCGCCGAATTTCGGGCGCATGACG GGACAAAAGGGGGATGGCTC
Downstream 100 bases:
>100_bases AGCGCCCCGGCCACCGGACGTCCGTCTGAGACCGGCCTGATCTTATCGCAAGCGCAGGCTGGGGGCCGGACCGATGGGCA AGACGCCTCCCAACAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Inner Membrane Protein; Extensin Domain Protein; Conserved Protein; Extensin Domain-Containing Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTLRTALCAMALVSTMPLTAGGQTAEVRVITATDLAPAGSLRPEARPGGTSVPESVGPGAIASAVGEAIGSAPVAEAPGP TRPQGLAGLFRPRGETPAATGAVSGGSSLAVAESLRPELRPSGLVETVRAAATRNIPSAVAQPGRDTGTLCGVLGLQGEE IAPVTGRINGCGIPDAVRLRIVHGITLTSPATINCTTAQSLSQWVLDAEDIIGRTGGGMTNLRVVASYACRTRNSRSGAR LSEHATGNAVDIAGIGLQNGSELSVLSDWRGGNSSIMRGLHEAACGTFGTVLGPDSDRFHQDHFHFDVASYRSGSYCR
Sequences:
>Translated_318_residues MTLRTALCAMALVSTMPLTAGGQTAEVRVITATDLAPAGSLRPEARPGGTSVPESVGPGAIASAVGEAIGSAPVAEAPGP TRPQGLAGLFRPRGETPAATGAVSGGSSLAVAESLRPELRPSGLVETVRAAATRNIPSAVAQPGRDTGTLCGVLGLQGEE IAPVTGRINGCGIPDAVRLRIVHGITLTSPATINCTTAQSLSQWVLDAEDIIGRTGGGMTNLRVVASYACRTRNSRSGAR LSEHATGNAVDIAGIGLQNGSELSVLSDWRGGNSSIMRGLHEAACGTFGTVLGPDSDRFHQDHFHFDVASYRSGSYCR >Mature_317_residues TLRTALCAMALVSTMPLTAGGQTAEVRVITATDLAPAGSLRPEARPGGTSVPESVGPGAIASAVGEAIGSAPVAEAPGPT RPQGLAGLFRPRGETPAATGAVSGGSSLAVAESLRPELRPSGLVETVRAAATRNIPSAVAQPGRDTGTLCGVLGLQGEEI APVTGRINGCGIPDAVRLRIVHGITLTSPATINCTTAQSLSQWVLDAEDIIGRTGGGMTNLRVVASYACRTRNSRSGARL SEHATGNAVDIAGIGLQNGSELSVLSDWRGGNSSIMRGLHEAACGTFGTVLGPDSDRFHQDHFHFDVASYRSGSYCR
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32359; Mature: 32228
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTALCAMALVSTMPLTAGGQTAEVRVITATDLAPAGSLRPEARPGGTSVPESVGPGA CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH IASAVGEAIGSAPVAEAPGPTRPQGLAGLFRPRGETPAATGAVSGGSSLAVAESLRPELR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PSGLVETVRAAATRNIPSAVAQPGRDTGTLCGVLGLQGEEIAPVTGRINGCGIPDAVRLR CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCHHHEEE IVHGITLTSPATINCTTAQSLSQWVLDAEDIIGRTGGGMTNLRVVASYACRTRNSRSGAR EEECEEECCCCEEEECCHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC LSEHATGNAVDIAGIGLQNGSELSVLSDWRGGNSSIMRGLHEAACGTFGTVLGPDSDRFH HHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC QDHFHFDVASYRSGSYCR CCCEEEEHHHCCCCCCCC >Mature Secondary Structure TLRTALCAMALVSTMPLTAGGQTAEVRVITATDLAPAGSLRPEARPGGTSVPESVGPGA CHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH IASAVGEAIGSAPVAEAPGPTRPQGLAGLFRPRGETPAATGAVSGGSSLAVAESLRPELR HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC PSGLVETVRAAATRNIPSAVAQPGRDTGTLCGVLGLQGEEIAPVTGRINGCGIPDAVRLR CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCHHHEEE IVHGITLTSPATINCTTAQSLSQWVLDAEDIIGRTGGGMTNLRVVASYACRTRNSRSGAR EEECEEECCCCEEEECCHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC LSEHATGNAVDIAGIGLQNGSELSVLSDWRGGNSSIMRGLHEAACGTFGTVLGPDSDRFH HHHCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC QDHFHFDVASYRSGSYCR CCCEEEEHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA