Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053505

Identifier: 89053505

GI number: 89053505

Start: 967668

End: 968015

Strand: Direct

Name: 89053505

Synonym: Jann_1014

Alternate gene names: NA

Gene position: 967668-968015 (Clockwise)

Preceding gene: 89053504

Following gene: 89053507

Centisome position: 22.41

GC content: 59.48

Gene sequence:

>348_bases
ATGGCGCAACTTGAAGGCGTCGTCAGTGATCGCGGGTCAAAATACGCGGTCTCTGGCGGGATCGTGCAGGGTCGTGCGGG
TGTGGATAGGTTCCTCAAAAACCTGAAACGAAAGAAGAAATACGCCAAGGCCTCCCATAACACCTGGGCCGTTCTGCTGG
ACGAGGGCCCGTTAAAAAACGACGACGGAGAGGGCGGCGCGGGCCAGATCATCTTGCAGATGTTGGAACGTGAGGGCCTG
CGGAACCACGTGATCGTCGTGACGCGTTGGTATGGCGGGAAACATCTGGGCGGCGACCGGTTTCGCCACGTGGCGACCTG
CGTGCGCGCTTATCTGGAGGCAATGTGA

Upstream 100 bases:

>100_bases
GTTGCCAGACCCCAGCGCGGGCGTTTTCAGCACCCATCCACCCAACGCCGCCCGGATTCGGATCGTGCGCGAAACGGCCG
CGCAGCGGTGCTGACGGGCA

Downstream 100 bases:

>100_bases
GCCTTGCACCGGGCAACGGCCCCACGCCCCATTTGACCGCAAAAACCGGTGTAGTGAACCTGTAGTTATCCTGTAGTTTT
TCTGTAACTACACATGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MAQLEGVVSDRGSKYAVSGGIVQGRAGVDRFLKNLKRKKKYAKASHNTWAVLLDEGPLKNDDGEGGAGQIILQMLEREGL
RNHVIVVTRWYGGKHLGGDRFRHVATCVRAYLEAM

Sequences:

>Translated_115_residues
MAQLEGVVSDRGSKYAVSGGIVQGRAGVDRFLKNLKRKKKYAKASHNTWAVLLDEGPLKNDDGEGGAGQIILQMLEREGL
RNHVIVVTRWYGGKHLGGDRFRHVATCVRAYLEAM
>Mature_114_residues
AQLEGVVSDRGSKYAVSGGIVQGRAGVDRFLKNLKRKKKYAKASHNTWAVLLDEGPLKNDDGEGGAGQIILQMLEREGLR
NHVIVVTRWYGGKHLGGDRFRHVATCVRAYLEAM

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923819, Length=114, Percent_Identity=35.0877192982456, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71995232, Length=114, Percent_Identity=36.8421052631579, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6320024, Length=53, Percent_Identity=52.8301886792453, Blast_Score=67, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6319904, Length=108, Percent_Identity=32.4074074074074, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12693; Mature: 12562

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLEGVVSDRGSKYAVSGGIVQGRAGVDRFLKNLKRKKKYAKASHNTWAVLLDEGPLKN
CCCCCCHHHCCCCEEEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DDGEGGAGQIILQMLEREGLRNHVIVVTRWYGGKHLGGDRFRHVATCVRAYLEAM
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQLEGVVSDRGSKYAVSGGIVQGRAGVDRFLKNLKRKKKYAKASHNTWAVLLDEGPLKN
CCCCCHHHCCCCEEEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DDGEGGAGQIILQMLEREGLRNHVIVVTRWYGGKHLGGDRFRHVATCVRAYLEAM
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA