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The map label for this gene is omp16 [H]

Identifier: 89053467

GI number: 89053467

Start: 932174

End: 932692

Strand: Direct

Name: omp16 [H]

Synonym: Jann_0976

Alternate gene names: 89053467

Gene position: 932174-932692 (Clockwise)

Preceding gene: 89053466

Following gene: 89053468

Centisome position: 21.59

GC content: 64.16

Gene sequence:

>519_bases
ATGACATTTTCCTTTCTGAAACCAACCCTTCTGGTAGCAACGCTGGCCCTTGCGGCCTGTTCGCAAGGGGGGCTGAACGG
CGATGGTGCAATTGGCGGCGCCGGTGGAGCCGGTGCCGGTGGCATTGGGTCGGGCGGGGTCGGTGATCCGACAAGCCCTG
TCTACTTCAACGAAGTGGTGGGTGACCGCGTTCTGTTCGCCGTCGATCAATCCACCCTGTCGTCAGGGGCGCAGAGCGTT
CTGGCGGGCCAAGCCCAATGGCTGTTGTCAAACCCCGAGTTCACCGCCCTTATCGAGGGGCACGCGGATGAGCAGGGCAC
GCGGGAATACAACCTCGCCCTTGGGGCGCGCCGTGCGGCTGCGGTACGCGAATATCTGGTGAGCCAGGGCGTGCCCGATG
CCCGCCTGCGCACGATCTCTTACGGCAAGGAACGTCCCCTGCAAATCTGCTCGGACGAGGCCTGTTATAGCCAGAACCGC
CGCGCGGTCACGGTGATTTCCGCCGGTCTGGGGGCCTGA

Upstream 100 bases:

>100_bases
GCGTCGGACCCCGCGTGGTCGCCCTTACAGAGTTGAATTGGCGGGGGCCGCGCGCCCGTGCTATACCTTTAAAAAACGAA
AGATCCGAGGATCAGAGCTC

Downstream 100 bases:

>100_bases
CATGCGGTTTGCTCTGGCCCTTTGTTGTGCGCTGATTGCGGGGCCCGCCGTGGCCCAGGACAACGCTGAAACGCTGGCGG
ATATCCGGCAGGAATTGTCC

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTFSFLKPTLLVATLALAACSQGGLNGDGAIGGAGGAGAGGIGSGGVGDPTSPVYFNEVVGDRVLFAVDQSTLSSGAQSV
LAGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARRAAAVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNR
RAVTVISAGLGA

Sequences:

>Translated_172_residues
MTFSFLKPTLLVATLALAACSQGGLNGDGAIGGAGGAGAGGIGSGGVGDPTSPVYFNEVVGDRVLFAVDQSTLSSGAQSV
LAGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARRAAAVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNR
RAVTVISAGLGA
>Mature_171_residues
TFSFLKPTLLVATLALAACSQGGLNGDGAIGGAGGAGAGGIGSGGVGDPTSPVYFNEVVGDRVLFAVDQSTLSSGAQSVL
AGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARRAAAVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNRR
AVTVISAGLGA

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=172, Percent_Identity=38.3720930232558, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17563; Mature: 17432

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSFLKPTLLVATLALAACSQGGLNGDGAIGGAGGAGAGGIGSGGVGDPTSPVYFNEVV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
GDRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARRAA
CCEEEEEECHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCCCCCCCCEEHHHHHHHHHH
AVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNRRAVTVISAGLGA
HHHHHHHHCCCCHHHEEEECCCCCCCHHHCCCCHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
TFSFLKPTLLVATLALAACSQGGLNGDGAIGGAGGAGAGGIGSGGVGDPTSPVYFNEVV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHH
GDRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQGTREYNLALGARRAA
CCEEEEEECHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCCCCCCCCEEHHHHHHHHHH
AVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNRRAVTVISAGLGA
HHHHHHHHCCCCHHHEEEECCCCCCCHHHCCCCHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]