Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is prmA [H]

Identifier: 89053452

GI number: 89053452

Start: 919728

End: 920600

Strand: Direct

Name: prmA [H]

Synonym: Jann_0961

Alternate gene names: 89053452

Gene position: 919728-920600 (Clockwise)

Preceding gene: 89053449

Following gene: 89053453

Centisome position: 21.3

GC content: 64.38

Gene sequence:

>873_bases
ATGCCCACCTGGACTGCCCTGACCACCCTGCCGCAAAAGCCCCCAGCCGAGGCGTTGGGAGAGGCGTTGGAGCAGTTGAC
CCCCGCGCCCACGGGCGTTGGCGTTTTCGAGATGGAGGACGGATCGGGCCTGTTCGAGGTTGGCGCGTATTTCATCGACC
CGCCCGACGAGATTGCGCTGGCGGTTCTGGCGGCGGCCTTTGGTGCAAAGGACTTCGCCGTGTCCGAAATACCGGATCAG
GATTGGGTCGCCCATGTGCGTCGAGAGTTGCACCCGGTGGAGGCCGGCCGCTTCTTCGTCTATGGCAGTCACGATGCTGA
TCGCGTGCCGGAGGGGTCTGTGCCCCTGCTGATCGAGGCCGCAATGGCATTTGGCACCGGGCATCACGGGACGACCAAGG
GTTGTCTCGAAGCCGTGGACAAACTGTTCACGGACGGGTTCTCGCCCCAGTCTGTCGCCGATATCGGCTGCGGCACAGCG
GTTCTGGCGATCGCGGCGGCGAAGGTTCTGCGCCTTCCGGTGATCGCATCCGACATTGATCCGCAGGCCGTGGACGTGGC
CCTTGCCAATGCGTCTGCCAATGATGTGGCCGAGTTCGTGTCCTGTGTGGAGGCGGCCGGGTTTGACCATGCCGCGCTGG
CGGAAGCCGGCCCCTACGACCTTGTTTTTGCGAACATTTTGAAGGGCCCGCTGATTGAGTTGGCCCCCGATGTCGCGACC
CATACCAAAGCAGGCGGCCATGTCATTTTGTCGGGGATCCTCACGCCCCAGGCGGACGATGTCATCGCTGCCTACGGCGC
CCAGGGCCTGGCCCTCACCGCCCGCGACGTGATCGGGGAGTGGACCACCTTGACCCTGCGGAAGACGCGTTAA

Upstream 100 bases:

>100_bases
GCGTGCGCGATCTGCTGAATTCCTCGGCTCCGTGCCTGCGATTGCCTAGGCGGGCAGAAGCGGCTACCGACGGGCAATAG
GACCCACACCGGAGAGCGCC

Downstream 100 bases:

>100_bases
CCATTTAGGTCAAAGTCGGCTCACCTTTGCCTAAAACTTGTCGCATTTCGCAGTGATATTCCGTATAGTCAACTTTGGTG
GGGGCAGTTAATGAGTTGTA

Product: 50S ribosomal protein L11P methyltransferase

Products: NA

Alternate protein names: L11 Mtase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPTWTALTTLPQKPPAEALGEALEQLTPAPTGVGVFEMEDGSGLFEVGAYFIDPPDEIALAVLAAAFGAKDFAVSEIPDQ
DWVAHVRRELHPVEAGRFFVYGSHDADRVPEGSVPLLIEAAMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTA
VLAIAAAKVLRLPVIASDIDPQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFANILKGPLIELAPDVAT
HTKAGGHVILSGILTPQADDVIAAYGAQGLALTARDVIGEWTTLTLRKTR

Sequences:

>Translated_290_residues
MPTWTALTTLPQKPPAEALGEALEQLTPAPTGVGVFEMEDGSGLFEVGAYFIDPPDEIALAVLAAAFGAKDFAVSEIPDQ
DWVAHVRRELHPVEAGRFFVYGSHDADRVPEGSVPLLIEAAMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTA
VLAIAAAKVLRLPVIASDIDPQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFANILKGPLIELAPDVAT
HTKAGGHVILSGILTPQADDVIAAYGAQGLALTARDVIGEWTTLTLRKTR
>Mature_289_residues
PTWTALTTLPQKPPAEALGEALEQLTPAPTGVGVFEMEDGSGLFEVGAYFIDPPDEIALAVLAAAFGAKDFAVSEIPDQD
WVAHVRRELHPVEAGRFFVYGSHDADRVPEGSVPLLIEAAMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTAV
LAIAAAKVLRLPVIASDIDPQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFANILKGPLIELAPDVATH
TKAGGHVILSGILTPQADDVIAAYGAQGLALTARDVIGEWTTLTLRKTR

Specific function: Methylates ribosomal protein L11 [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]

Homologues:

Organism=Escherichia coli, GI2367208, Length=257, Percent_Identity=34.2412451361868, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR004498 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 30131; Mature: 30000

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTWTALTTLPQKPPAEALGEALEQLTPAPTGVGVFEMEDGSGLFEVGAYFIDPPDEIAL
CCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCEEECCHHHHHH
AVLAAAFGAKDFAVSEIPDQDWVAHVRRELHPVEAGRFFVYGSHDADRVPEGSVPLLIEA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
AMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTAVLAIAAAKVLRLPVIASDID
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHCCCCC
PQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFANILKGPLIELAPDVAT
CHHEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCCHHH
HTKAGGHVILSGILTPQADDVIAAYGAQGLALTARDVIGEWTTLTLRKTR
HCCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
PTWTALTTLPQKPPAEALGEALEQLTPAPTGVGVFEMEDGSGLFEVGAYFIDPPDEIAL
CCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCEEECCHHHHHH
AVLAAAFGAKDFAVSEIPDQDWVAHVRRELHPVEAGRFFVYGSHDADRVPEGSVPLLIEA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHH
AMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTAVLAIAAAKVLRLPVIASDID
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHCCCCC
PQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFANILKGPLIELAPDVAT
CHHEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCCHHH
HTKAGGHVILSGILTPQADDVIAAYGAQGLALTARDVIGEWTTLTLRKTR
HCCCCCEEEEEECCCCCCCCHHHHHCCCCEEEEHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA