Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053432

Identifier: 89053432

GI number: 89053432

Start: 899629

End: 900339

Strand: Direct

Name: 89053432

Synonym: Jann_0941

Alternate gene names: NA

Gene position: 899629-900339 (Clockwise)

Preceding gene: 315111547

Following gene: 89053434

Centisome position: 20.83

GC content: 61.6

Gene sequence:

>711_bases
ATGATTAAGACGATACTGACGGCCGCCGCCTTGGCGACCCTGCCCATGGCCGCGCAAGCCACAACCCTCGATTTCGACCT
GGACGGCGGCACCGCTGTTTATCAGGCTGGCAATCCTACCACCAACGTGTTGCTAGGGTATGTCCTTGGCGGGCGCACCT
TCTCTTTCTCGCAAAATACGATGAACGGTCAGGCGTCCAGTGGTGCCAATCTGTTCGATTCGATGTCCTGCACCAACGCA
ACGACGCCAGTTGTCGCCTCCTGCCGCGGCAACGACGATGGGGATCTGGTGCCCGTGACCCAAGGTGAAAATGGCATCTA
CGGCAACGTCCTGATCCGTCAGCAAGCCAGCGCGAGGCTGGATGACGATGCGGCAGGCGACGGCAGCCTGTTCATCACGC
TGGACAGCGGTCCCGCCTTTCGCCTGGCGGGGTTCTCGGCGATTGACGGCGCATCCATATCGCTGTTTCGCAACGGCGTG
AACGTCTTCGGCCCCGAGAACAACCGGGGCAACCGAGAGACGGAATTGTTCAGCGTTGAAAACTCCGGCATCTTTAATGT
GGGTGACACGCTTGAGGTACGCCTTCTGGGCTCCGGTGGTGTGGACGCTTTCCAACTGGCCCCGGTTCCGCTGCCGGCCG
GTGTGGTTTTGCTGTTGGGCGCATTGGGCGGTTTGGGTCTGATGCGCCGTCGGGCCACCCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
ACGAGTCGGTGAATTATTTTTTATCACGCGCCGACATCCAATGCAGGGGCTATTCCGCCTGTTTGCGCCCGAGATCCTTT
GACCCACTGGAAGAGTTTTT

Downstream 100 bases:

>100_bases
GCCGACACGTCTTCCAGTATGCAGAAGGGCCGCATTGCGCGGCCCTTTTTTGTTTCGAAATCGGGATGCCGGGACACAAC
AGGGGCTGATGTGCCCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIKTILTAAALATLPMAAQATTLDFDLDGGTAVYQAGNPTTNVLLGYVLGGRTFSFSQNTMNGQASSGANLFDSMSCTNA
TTPVVASCRGNDDGDLVPVTQGENGIYGNVLIRQQASARLDDDAAGDGSLFITLDSGPAFRLAGFSAIDGASISLFRNGV
NVFGPENNRGNRETELFSVENSGIFNVGDTLEVRLLGSGGVDAFQLAPVPLPAGVVLLLGALGGLGLMRRRATRAA

Sequences:

>Translated_236_residues
MIKTILTAAALATLPMAAQATTLDFDLDGGTAVYQAGNPTTNVLLGYVLGGRTFSFSQNTMNGQASSGANLFDSMSCTNA
TTPVVASCRGNDDGDLVPVTQGENGIYGNVLIRQQASARLDDDAAGDGSLFITLDSGPAFRLAGFSAIDGASISLFRNGV
NVFGPENNRGNRETELFSVENSGIFNVGDTLEVRLLGSGGVDAFQLAPVPLPAGVVLLLGALGGLGLMRRRATRAA
>Mature_236_residues
MIKTILTAAALATLPMAAQATTLDFDLDGGTAVYQAGNPTTNVLLGYVLGGRTFSFSQNTMNGQASSGANLFDSMSCTNA
TTPVVASCRGNDDGDLVPVTQGENGIYGNVLIRQQASARLDDDAAGDGSLFITLDSGPAFRLAGFSAIDGASISLFRNGV
NVFGPENNRGNRETELFSVENSGIFNVGDTLEVRLLGSGGVDAFQLAPVPLPAGVVLLLGALGGLGLMRRRATRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24252; Mature: 24252

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTILTAAALATLPMAAQATTLDFDLDGGTAVYQAGNPTTNVLLGYVLGGRTFSFSQNT
CCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHEEEEEEECCEEEEECCCC
MNGQASSGANLFDSMSCTNATTPVVASCRGNDDGDLVPVTQGENGIYGNVLIRQQASARL
CCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCC
DDDAAGDGSLFITLDSGPAFRLAGFSAIDGASISLFRNGVNVFGPENNRGNRETELFSVE
CCCCCCCCEEEEEECCCCCEEEECCEECCCCEEEEEECCCEEECCCCCCCCCCEEEEEEC
NSGIFNVGDTLEVRLLGSGGVDAFQLAPVPLPAGVVLLLGALGGLGLMRRRATRAA
CCCEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MIKTILTAAALATLPMAAQATTLDFDLDGGTAVYQAGNPTTNVLLGYVLGGRTFSFSQNT
CCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCHHHEEEEEEECCEEEEECCCC
MNGQASSGANLFDSMSCTNATTPVVASCRGNDDGDLVPVTQGENGIYGNVLIRQQASARL
CCCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCC
DDDAAGDGSLFITLDSGPAFRLAGFSAIDGASISLFRNGVNVFGPENNRGNRETELFSVE
CCCCCCCCEEEEEECCCCCEEEECCEECCCCEEEEEECCCEEECCCCCCCCCCEEEEEEC
NSGIFNVGDTLEVRLLGSGGVDAFQLAPVPLPAGVVLLLGALGGLGLMRRRATRAA
CCCEEECCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA