Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053345
Identifier: 89053345
GI number: 89053345
Start: 809262
End: 810542
Strand: Direct
Name: 89053345
Synonym: Jann_0854
Alternate gene names: NA
Gene position: 809262-810542 (Clockwise)
Preceding gene: 89053344
Following gene: 89053346
Centisome position: 18.74
GC content: 64.56
Gene sequence:
>1281_bases ATGACGAACACGGCAGGTCTCGGCTCGGTCAATTGTACCTCCTGCGGCGCGGGCCTGTCGGTTCTGGGCGGCGGGCGCGT GTTGTCCCATGTCTGCGGCTATTGCGGCGCAGTGCTGGACACGCAGGACGGCTACAAGCAGGTCGACAGTATCGGCAAGC GCAACCACCCCGACAGTCCCGTGCAGATCGGCCAGACCCTGACGCTGGACGGCGTGGAGTTCACGGTTATCGGGACGCTT GGCATCTCTGAGCGCTATGGCGGCCAGACGTGGAAATGGGTGGAACATCAGGTCTATTCGCCGACCCACGGCTACCTGTG GCTGAACTATGAAGAGGGCCAGCTGACCTACACGCGCAAGGTGCGCGACTTCAACATGCGCCATTGGCTGAGCGCATCGA CCGTGGAGCGCGCCGAGGTGCCGCCGACACGCACCTACCGCGACGAGAAGTACCGCTATTATGACATGTCGGTCACGCAT ATCGACTTCATGGAGGGCGAGTTCAACTGGGTCCCCAAACTGGGCGAGAAGAAGGAGGTCGTGAACCTTCTGGGGCCGGA GGCGATGCTGTCGCTGGTCAAATCCCGGACCGAGCGGGAGGTGGAATTGACCCGCCTGCTGCCCCGCGCCGAGACCGCGG CGGATCTGGGCATTTCGGAGCAGGCCCTGGGCCGCGTGGGGGACGTGCATCCCCTGACCCCCTACACCGCCCTGCCCGAG GAGGGCCTTCTGCGGAAGGTGCTTGGTGCGACGGCGATCGCGGCGGCGCTGTTGGGAGGCGTCTTCTGGCTGAGCGGCGG GCGCGAGATCCTGTCGTCGCCGTATCAGCAGGTCACGTCCCTGCCGCAAACCTTCGAGTTCCAGGTCGACAATACCACGC AGCTGGCGCAGGTGCAGTTCCTGACCACGTTCAACAATCAATGGGCCACCCTGGGGACTGAAATCCGCGGGCCGGACGGC ACTGTGGTTCTGGCAGGTGAGCGCACGGTGTCGTATTACTCCGGCAGTTCCGGCGGGGAGAATTGGTCCGAGGGCAGCCG CCGCAACACCTTCCGCTTCCGCCCCAGCACGCCGGGCACCTACACCGCGTCTTTGGCGCAAACCCAGGCGTCGAACCCCG ACAATGGGACGGTGTCGCTGCGCGTATCCCAGGGCAAACCGACGGGCTTTTGGCTGATTGGCCTGGCGATTCTGGCTGGT ATGGGGTGGCTGTACGTGGTGGGACGGCGCGCGATGCATTCGAAACGCCGGTTCTCCGGCTCTGATTGGAACGACGAGTG A
Upstream 100 bases:
>100_bases TATCCGGCGAATTCTGGGAAGGCGGGCACCAATGGCATGAAGGCGGATGGCTTGATCCCTTCACCCTGAGGGTGGATCGC CAGGACGGGAGCAGCCGGCC
Downstream 100 bases:
>100_bases TGGCCCCGATCCGTCTTATCATCATCGGCGGCGCGGTGATCGCGCTTCTGGGGGCCAGTTACCTCAGCTATTATGGCGTG GGGCGCGAAAGCCGCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTNTAGLGSVNCTSCGAGLSVLGGGRVLSHVCGYCGAVLDTQDGYKQVDSIGKRNHPDSPVQIGQTLTLDGVEFTVIGTL GISERYGGQTWKWVEHQVYSPTHGYLWLNYEEGQLTYTRKVRDFNMRHWLSASTVERAEVPPTRTYRDEKYRYYDMSVTH IDFMEGEFNWVPKLGEKKEVVNLLGPEAMLSLVKSRTEREVELTRLLPRAETAADLGISEQALGRVGDVHPLTPYTALPE EGLLRKVLGATAIAAALLGGVFWLSGGREILSSPYQQVTSLPQTFEFQVDNTTQLAQVQFLTTFNNQWATLGTEIRGPDG TVVLAGERTVSYYSGSSGGENWSEGSRRNTFRFRPSTPGTYTASLAQTQASNPDNGTVSLRVSQGKPTGFWLIGLAILAG MGWLYVVGRRAMHSKRRFSGSDWNDE
Sequences:
>Translated_426_residues MTNTAGLGSVNCTSCGAGLSVLGGGRVLSHVCGYCGAVLDTQDGYKQVDSIGKRNHPDSPVQIGQTLTLDGVEFTVIGTL GISERYGGQTWKWVEHQVYSPTHGYLWLNYEEGQLTYTRKVRDFNMRHWLSASTVERAEVPPTRTYRDEKYRYYDMSVTH IDFMEGEFNWVPKLGEKKEVVNLLGPEAMLSLVKSRTEREVELTRLLPRAETAADLGISEQALGRVGDVHPLTPYTALPE EGLLRKVLGATAIAAALLGGVFWLSGGREILSSPYQQVTSLPQTFEFQVDNTTQLAQVQFLTTFNNQWATLGTEIRGPDG TVVLAGERTVSYYSGSSGGENWSEGSRRNTFRFRPSTPGTYTASLAQTQASNPDNGTVSLRVSQGKPTGFWLIGLAILAG MGWLYVVGRRAMHSKRRFSGSDWNDE >Mature_425_residues TNTAGLGSVNCTSCGAGLSVLGGGRVLSHVCGYCGAVLDTQDGYKQVDSIGKRNHPDSPVQIGQTLTLDGVEFTVIGTLG ISERYGGQTWKWVEHQVYSPTHGYLWLNYEEGQLTYTRKVRDFNMRHWLSASTVERAEVPPTRTYRDEKYRYYDMSVTHI DFMEGEFNWVPKLGEKKEVVNLLGPEAMLSLVKSRTEREVELTRLLPRAETAADLGISEQALGRVGDVHPLTPYTALPEE GLLRKVLGATAIAAALLGGVFWLSGGREILSSPYQQVTSLPQTFEFQVDNTTQLAQVQFLTTFNNQWATLGTEIRGPDGT VVLAGERTVSYYSGSSGGENWSEGSRRNTFRFRPSTPGTYTASLAQTQASNPDNGTVSLRVSQGKPTGFWLIGLAILAGM GWLYVVGRRAMHSKRRFSGSDWNDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46928; Mature: 46797
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTAGLGSVNCTSCGAGLSVLGGGRVLSHVCGYCGAVLDTQDGYKQVDSIGKRNHPDSP CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC VQIGQTLTLDGVEFTVIGTLGISERYGGQTWKWVEHQVYSPTHGYLWLNYEEGQLTYTRK CCCCCEEEECCEEEEEEEEECCCHHCCCCCEEEHHHEECCCCCCEEEEEEECCEEEEEEE VRDFNMRHWLSASTVERAEVPPTRTYRDEKYRYYDMSVTHIDFMEGEFNWVPKLGEKKEV HHHCCHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCHHHH VNLLGPEAMLSLVKSRTEREVELTRLLPRAETAADLGISEQALGRVGDVHPLTPYTALPE HHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCH EGLLRKVLGATAIAAALLGGVFWLSGGREILSSPYQQVTSLPQTFEFQVDNTTQLAQVQF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHCCCCEEEEEECCCCEEEEEEE LTTFNNQWATLGTEIRGPDGTVVLAGERTVSYYSGSSGGENWSEGSRRNTFRFRPSTPGT EEECCCCEEECCCEEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC YTASLAQTQASNPDNGTVSLRVSQGKPTGFWLIGLAILAGMGWLYVVGRRAMHSKRRFSG EEHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC SDWNDE CCCCCC >Mature Secondary Structure TNTAGLGSVNCTSCGAGLSVLGGGRVLSHVCGYCGAVLDTQDGYKQVDSIGKRNHPDSP CCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC VQIGQTLTLDGVEFTVIGTLGISERYGGQTWKWVEHQVYSPTHGYLWLNYEEGQLTYTRK CCCCCEEEECCEEEEEEEEECCCHHCCCCCEEEHHHEECCCCCCEEEEEEECCEEEEEEE VRDFNMRHWLSASTVERAEVPPTRTYRDEKYRYYDMSVTHIDFMEGEFNWVPKLGEKKEV HHHCCHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCHHHH VNLLGPEAMLSLVKSRTEREVELTRLLPRAETAADLGISEQALGRVGDVHPLTPYTALPE HHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCH EGLLRKVLGATAIAAALLGGVFWLSGGREILSSPYQQVTSLPQTFEFQVDNTTQLAQVQF HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHCCCCEEEEEECCCCEEEEEEE LTTFNNQWATLGTEIRGPDGTVVLAGERTVSYYSGSSGGENWSEGSRRNTFRFRPSTPGT EEECCCCEEECCCEEECCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC YTASLAQTQASNPDNGTVSLRVSQGKPTGFWLIGLAILAGMGWLYVVGRRAMHSKRRFSG EEHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC SDWNDE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA