Click here to switch to the map view.

The map label for this gene is ygjG [C]

Identifier: 89053342

GI number: 89053342

Start: 806461

End: 807843

Strand: Direct

Name: ygjG [C]

Synonym: Jann_0851

Alternate gene names: 89053342

Gene position: 806461-807843 (Clockwise)

Preceding gene: 89053336

Following gene: 89053343

Centisome position: 18.68

GC content: 63.49

Gene sequence:

>1383_bases
ATGCTGACGAACGACCAATTGAGCCAGTGGGATCAGGACCACTTTTTCCACCCCTCTACCGCCCTGGGGGCCCATGCGCG
GGGGGAAGCGCCGGGGATGGTCGTGCAGACGGCGGAGGGATGCCACATCACCGACCGAAACGGCAACCGGATGCTGGATG
CCTTCGCGGGCCTCTATTGCGTCAACATCGGCTATGGCCGGCAGGAGGTGGCGGAGGCCATCGCCGCCCAGGCCCGCGAG
CTGGCCTATTACCATTCGTATATGGGCAACGGGACGGAGGCGTCGATCACGCTAGCCAAGATGGTGACGGAGCGCGCGCC
GGAGGGCATGAACCGCGTCTATTTCGGCCAGGGCGGATCAGACGCGAATGAGACCAACATCAAGCTGGTCTGGTATTATA
ACAACATTCTGGGACGGCCCGAGAAGAAGAAAATCGTCTCTCGCTGGCGGGGATATCACGGCTCTGGCCTGATGAGCGGG
TCGCTGACGGGCCTCTCGCTTTTCCACAGGAAGTTTGATCTGCCCTTGGACAAAGTCCTCCATACGACGGCACCATACTA
CTTCCAGCGCGAGAACGTTGCACAAAGCGAACAAGAGTTCACAGCACAATGTGTGGCGGATCTGGAGGAGTTGATCGCGC
GGGAGGGGGCCGACACCATTGCCGCGTTCATTGCAGAACCGGTCATTGGCACCGGCGGCATTGTTCCGCCGCCCGAAGGG
TATTGGAACGCGATCCAGCCTGTCCTGAAGCGCCACGATATCCTGCTGATCGCCGATGAGGTCATCACTGGCTTTGGACG
GTTGGGCGCGATGTTCGGCTCTCCACTCTATGGGATCGAGCCCGATATCATGACCATCGCCAAGGGCCTGACCAGCGCCT
ATGCGCCGCTGTCGGGATCGATTGTGCACGACCGCGTCTGGGATGTTCTGGCCCGGGGGACGGATGAGAATGGGCCGTTG
GGCCACGGCTGGACCTACTCTGCCCACCCAATCGGGGCGGCGGCTGGCGTGGCGAACCTGACGCTGCTCGACACTCTTGG
GCTGGTGGACAATGCCGCTGACGTGGGGCCGTATCTGACCGCCCAGATGCGCGCGGCGATGCAGGATCATGCCCATGTCG
GCGATATCCGGGGCGTGGGCATGTTGACAGCGGTGGAACTGGTTGCGGACCGTGACAAGGGCTCGGGCGTCGGGGCCGGG
TTCGACCCGGCGGCCAAGATCGTGCCGCAGATCTCTGCCGCGATGGCGAAGCGCGGGGTGATCGCGCGCGCCATGCCGCA
GGCCGATATCGTGGGCTTCTCCCCGCCGCTATGCCTGACCCGGGCGGAGGCGGACACGATTGTGTCTGTCACGGCCGAGG
CCGTGGCGGAGGTTTTGGGCTGA

Upstream 100 bases:

>100_bases
TTGAGTGAATTCTGTGAAAGCTCATATCACGGGATGTGATTTGCAAACGCATCGCCGTTGGCTTGAGGATGACGGCATCT
CTTATGTCGGAGGACCTCAG

Downstream 100 bases:

>100_bases
TCCCTCTGACTGCATCCGTGCGGTGTCAATGATCCAGAACAAGGCCCTGTGGCGTCCTGACCCCCTATAGGTCGGCAGGG
GCCTGGTCGCGGTCGTGCGG

Product: hypothetical protein

Products: L-Glutamate; L-Glutamate 5-semialdehyde [C]

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MLTNDQLSQWDQDHFFHPSTALGAHARGEAPGMVVQTAEGCHITDRNGNRMLDAFAGLYCVNIGYGRQEVAEAIAAQARE
LAYYHSYMGNGTEASITLAKMVTERAPEGMNRVYFGQGGSDANETNIKLVWYYNNILGRPEKKKIVSRWRGYHGSGLMSG
SLTGLSLFHRKFDLPLDKVLHTTAPYYFQRENVAQSEQEFTAQCVADLEELIAREGADTIAAFIAEPVIGTGGIVPPPEG
YWNAIQPVLKRHDILLIADEVITGFGRLGAMFGSPLYGIEPDIMTIAKGLTSAYAPLSGSIVHDRVWDVLARGTDENGPL
GHGWTYSAHPIGAAAGVANLTLLDTLGLVDNAADVGPYLTAQMRAAMQDHAHVGDIRGVGMLTAVELVADRDKGSGVGAG
FDPAAKIVPQISAAMAKRGVIARAMPQADIVGFSPPLCLTRAEADTIVSVTAEAVAEVLG

Sequences:

>Translated_460_residues
MLTNDQLSQWDQDHFFHPSTALGAHARGEAPGMVVQTAEGCHITDRNGNRMLDAFAGLYCVNIGYGRQEVAEAIAAQARE
LAYYHSYMGNGTEASITLAKMVTERAPEGMNRVYFGQGGSDANETNIKLVWYYNNILGRPEKKKIVSRWRGYHGSGLMSG
SLTGLSLFHRKFDLPLDKVLHTTAPYYFQRENVAQSEQEFTAQCVADLEELIAREGADTIAAFIAEPVIGTGGIVPPPEG
YWNAIQPVLKRHDILLIADEVITGFGRLGAMFGSPLYGIEPDIMTIAKGLTSAYAPLSGSIVHDRVWDVLARGTDENGPL
GHGWTYSAHPIGAAAGVANLTLLDTLGLVDNAADVGPYLTAQMRAAMQDHAHVGDIRGVGMLTAVELVADRDKGSGVGAG
FDPAAKIVPQISAAMAKRGVIARAMPQADIVGFSPPLCLTRAEADTIVSVTAEAVAEVLG
>Mature_460_residues
MLTNDQLSQWDQDHFFHPSTALGAHARGEAPGMVVQTAEGCHITDRNGNRMLDAFAGLYCVNIGYGRQEVAEAIAAQARE
LAYYHSYMGNGTEASITLAKMVTERAPEGMNRVYFGQGGSDANETNIKLVWYYNNILGRPEKKKIVSRWRGYHGSGLMSG
SLTGLSLFHRKFDLPLDKVLHTTAPYYFQRENVAQSEQEFTAQCVADLEELIAREGADTIAAFIAEPVIGTGGIVPPPEG
YWNAIQPVLKRHDILLIADEVITGFGRLGAMFGSPLYGIEPDIMTIAKGLTSAYAPLSGSIVHDRVWDVLARGTDENGPL
GHGWTYSAHPIGAAAGVANLTLLDTLGLVDNAADVGPYLTAQMRAAMQDHAHVGDIRGVGMLTAVELVADRDKGSGVGAG
FDPAAKIVPQISAAMAKRGVIARAMPQADIVGFSPPLCLTRAEADTIVSVTAEAVAEVLG

Specific function: Unknown

COG id: COG0161

COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI37574042, Length=434, Percent_Identity=26.2672811059908, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI226442705, Length=435, Percent_Identity=26.6666666666667, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI13994255, Length=440, Percent_Identity=25.6818181818182, Blast_Score=132, Evalue=9e-31,
Organism=Homo sapiens, GI226442709, Length=376, Percent_Identity=27.3936170212766, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI24119277, Length=434, Percent_Identity=26.036866359447, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557809, Length=458, Percent_Identity=23.7991266375546, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI284507298, Length=237, Percent_Identity=26.1603375527426, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI188536080, Length=422, Percent_Identity=22.5118483412322, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI38679950, Length=422, Percent_Identity=22.5118483412322, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI38679946, Length=422, Percent_Identity=22.5118483412322, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI145693181, Length=415, Percent_Identity=26.5060240963855, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1788044, Length=410, Percent_Identity=27.3170731707317, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1787560, Length=425, Percent_Identity=27.7647058823529, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1789016, Length=424, Percent_Identity=25.4716981132075, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1786991, Length=392, Percent_Identity=28.0612244897959, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1789759, Length=423, Percent_Identity=25.0591016548463, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1786349, Length=368, Percent_Identity=23.6413043478261, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI32564660, Length=449, Percent_Identity=26.5033407572383, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71992977, Length=437, Percent_Identity=25.629290617849, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI25144271, Length=451, Percent_Identity=22.8381374722838, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25144274, Length=239, Percent_Identity=25.9414225941423, Blast_Score=110, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323470, Length=468, Percent_Identity=26.9230769230769, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6324386, Length=371, Percent_Identity=27.4932614555256, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324432, Length=356, Percent_Identity=26.9662921348315, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6321456, Length=375, Percent_Identity=24.8, Blast_Score=90, Evalue=8e-19,
Organism=Drosophila melanogaster, GI28574759, Length=478, Percent_Identity=26.9874476987448, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI161085790, Length=433, Percent_Identity=27.0207852193995, Blast_Score=131, Evalue=8e-31,
Organism=Drosophila melanogaster, GI21356575, Length=433, Percent_Identity=24.0184757505774, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21357415, Length=447, Percent_Identity=23.489932885906, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281366494, Length=279, Percent_Identity=26.5232974910394, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24667139, Length=279, Percent_Identity=26.5232974910394, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24667143, Length=279, Percent_Identity=26.5232974910394, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: 2.6.1.13 [C]

Molecular weight: Translated: 49192; Mature: 49192

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNDQLSQWDQDHFFHPSTALGAHARGEAPGMVVQTAEGCHITDRNGNRMLDAFAGLYC
CCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHCEEE
VNIGYGRQEVAEAIAAQARELAYYHSYMGNGTEASITLAKMVTERAPEGMNRVYFGQGGS
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
DANETNIKLVWYYNNILGRPEKKKIVSRWRGYHGSGLMSGSLTGLSLFHRKFDLPLDKVL
CCCCCEEEEEEEECCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HTTAPYYFQRENVAQSEQEFTAQCVADLEELIAREGADTIAAFIAEPVIGTGGIVPPPEG
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
YWNAIQPVLKRHDILLIADEVITGFGRLGAMFGSPLYGIEPDIMTIAKGLTSAYAPLSGS
HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
IVHDRVWDVLARGTDENGPLGHGWTYSAHPIGAAAGVANLTLLDTLGLVDNAADVGPYLT
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHH
AQMRAAMQDHAHVGDIRGVGMLTAVELVADRDKGSGVGAGFDPAAKIVPQISAAMAKRGV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
IARAMPQADIVGFSPPLCLTRAEADTIVSVTAEAVAEVLG
HHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLTNDQLSQWDQDHFFHPSTALGAHARGEAPGMVVQTAEGCHITDRNGNRMLDAFAGLYC
CCCCCHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHCEEE
VNIGYGRQEVAEAIAAQARELAYYHSYMGNGTEASITLAKMVTERAPEGMNRVYFGQGGS
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC
DANETNIKLVWYYNNILGRPEKKKIVSRWRGYHGSGLMSGSLTGLSLFHRKFDLPLDKVL
CCCCCEEEEEEEECCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
HTTAPYYFQRENVAQSEQEFTAQCVADLEELIAREGADTIAAFIAEPVIGTGGIVPPPEG
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
YWNAIQPVLKRHDILLIADEVITGFGRLGAMFGSPLYGIEPDIMTIAKGLTSAYAPLSGS
HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCC
IVHDRVWDVLARGTDENGPLGHGWTYSAHPIGAAAGVANLTLLDTLGLVDNAADVGPYLT
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHH
AQMRAAMQDHAHVGDIRGVGMLTAVELVADRDKGSGVGAGFDPAAKIVPQISAAMAKRGV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
IARAMPQADIVGFSPPLCLTRAEADTIVSVTAEAVAEVLG
HHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Oxoglutarate; Ornithine [C]

Specific reaction: 2-Oxoglutarate + Ornithine --> L-Glutamate + L-Glutamate 5-semialdehyde [C]

General reaction: Amino group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]