Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053336

Identifier: 89053336

GI number: 89053336

Start: 800684

End: 801025

Strand: Direct

Name: 89053336

Synonym: Jann_0845

Alternate gene names: NA

Gene position: 800684-801025 (Clockwise)

Preceding gene: 89053335

Following gene: 89053342

Centisome position: 18.54

GC content: 61.7

Gene sequence:

>342_bases
ATGGCCACCAATGATTTTCACGCGGCAAGCCGGTGCCTGACCGAGGATTTCCGCCTTCAATGGCCCCAATCTGACGAAAT
GATCGAGGGCCGGGAAAATTTTGCAGCCGTGAATACAGCCTATCCGGCGAACGGCCTTTGGACGTTTGATTTGCGCCGCA
TCGTGGGGGAAGGCGATCAGATCGTGACCGAGGTCGGCGTCAGCGACGGCGTGGAGCGGGCCACGGCGTTGACATTCCAC
ACGGTGCGCGGCGATCTGATTGCCCTTCAGCGAGAGTTCTGGCCTGACCCGTTCGAGGCGCCGATCTGGCGGGCAAAATG
GGTCCGGCGACCGGGGCCATAG

Upstream 100 bases:

>100_bases
TCTGCCGTGTTCCGCTACATTCGCGCGTGAGCGTCGCGATCCCAGGAGATCGCGCGTGAGCCGTGCCGCCCAACGGGTTG
TCCGCGGGTTCTGGCGCACC

Downstream 100 bases:

>100_bases
AGGCTGATGTGGCACGGGGGCCGCCCCCCTCACGCCGCTTTTTCGGGGAAAAAGACGCGTACCCCCGAGGAGTTGTAATG
GCCCAGATGGAACTGCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MATNDFHAASRCLTEDFRLQWPQSDEMIEGRENFAAVNTAYPANGLWTFDLRRIVGEGDQIVTEVGVSDGVERATALTFH
TVRGDLIALQREFWPDPFEAPIWRAKWVRRPGP

Sequences:

>Translated_113_residues
MATNDFHAASRCLTEDFRLQWPQSDEMIEGRENFAAVNTAYPANGLWTFDLRRIVGEGDQIVTEVGVSDGVERATALTFH
TVRGDLIALQREFWPDPFEAPIWRAKWVRRPGP
>Mature_112_residues
ATNDFHAASRCLTEDFRLQWPQSDEMIEGRENFAAVNTAYPANGLWTFDLRRIVGEGDQIVTEVGVSDGVERATALTFHT
VRGDLIALQREFWPDPFEAPIWRAKWVRRPGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12891; Mature: 12759

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNDFHAASRCLTEDFRLQWPQSDEMIEGRENFAAVNTAYPANGLWTFDLRRIVGEGDQ
CCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCEEHHHHHHHHCCCCC
IVTEVGVSDGVERATALTFHTVRGDLIALQREFWPDPFEAPIWRAKWVRRPGP
EEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
ATNDFHAASRCLTEDFRLQWPQSDEMIEGRENFAAVNTAYPANGLWTFDLRRIVGEGDQ
CCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCCEEHHHHHHHHCCCCC
IVTEVGVSDGVERATALTFHTVRGDLIALQREFWPDPFEAPIWRAKWVRRPGP
EEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA