Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053321

Identifier: 89053321

GI number: 89053321

Start: 784435

End: 785058

Strand: Direct

Name: 89053321

Synonym: Jann_0830

Alternate gene names: NA

Gene position: 784435-785058 (Clockwise)

Preceding gene: 89053320

Following gene: 89053322

Centisome position: 18.17

GC content: 63.14

Gene sequence:

>624_bases
ATGAGACCTATCGTGTTTGCCCTAGCCATTTGCACAATTGCCGCCCCGGCATGCGCCCAGGACGAGCCGATCTACGCACC
CTGCGTAACCCGGTTTCCGGCGCCGGAGGAGTTCGGGACAGGTGGCGCGTTCACCGCTGCGCTTGAGGCGCAGGGTTGGG
TGATGCAGACCTCTGACGCCGCGCGGCTGGCTGCGGCGGCACCGCTGGCGGACATCGAGGCTCTGGTGTTTGCGCCCGAT
GCGTTTGCGGACGCTGCGGACGCTCTCGACTATGCCAGTCGAGCGATGACCCGATACGAACCTCAAATGGTGTTCATCGA
GATCTTCACGCGCGCCGGTCTCTCGGCCTCGCTCTCTGCTGTCGAGTTGGACCCCGGATATGTCACGGTAAGGTGCACAT
TTGCCGGGCCAGAGGTTCCGTCCGTCAAGGATTTTCTGGACACGGATCGGGTGCTTGCCGACGGCTCCGCCGCGCGGGTC
CGTCTGATCCCGCAGGACACGCCTGATGGTGTTGTCACCTACAGCATCGTCGCCTTCCAGTTCGATGGCGACGATACGAC
CCTTGCCCCCATTACCGGGCGGGAGGGGCTTCAAACGAGTTTCATCTATCGGGTGCCGGAATGA

Upstream 100 bases:

>100_bases
TTCTGTCCGGCATCCAGATGCTGCCAAGCCTGCTGGTTATCATCTGGATGGCCAGCAAAGGCACCGACGGCCCAAACCGA
TATGGGGAGGATCCCTTGGC

Downstream 100 bases:

>100_bases
CTCAGACCCCGCCCCGCCCAAGTGCAATATCCCCCCTCAACCGAGGATTTAAGCCATGAATGACCAATCTCCCAACGATA
CCTTCCATGCCTCCAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD
AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV
RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE

Sequences:

>Translated_207_residues
MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD
AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV
RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE
>Mature_207_residues
MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD
AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV
RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21995; Mature: 21995

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDA
CCHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCHHCCCCCEEEEEEECCCEEEECCCH
ARLAAAAPLADIEALVFAPDAFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSA
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCEE
VELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARVRLIPQDTPDGVVTYSIVAFQ
EEECCCEEEEEEEECCCCCCCHHHHHCCCCEEECCCCEEEEECCCCCCCCEEEEEEEEEE
FDGDDTTLAPITGREGLQTSFIYRVPE
ECCCCCEEEEECCCCCCCEEEEEECCC
>Mature Secondary Structure
MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDA
CCHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCHHCCCCCEEEEEEECCCEEEECCCH
ARLAAAAPLADIEALVFAPDAFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSA
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCEE
VELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARVRLIPQDTPDGVVTYSIVAFQ
EEECCCEEEEEEEECCCCCCCHHHHHCCCCEEECCCCEEEEECCCCCCCCEEEEEEEEEE
FDGDDTTLAPITGREGLQTSFIYRVPE
ECCCCCEEEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA