Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053321
Identifier: 89053321
GI number: 89053321
Start: 784435
End: 785058
Strand: Direct
Name: 89053321
Synonym: Jann_0830
Alternate gene names: NA
Gene position: 784435-785058 (Clockwise)
Preceding gene: 89053320
Following gene: 89053322
Centisome position: 18.17
GC content: 63.14
Gene sequence:
>624_bases ATGAGACCTATCGTGTTTGCCCTAGCCATTTGCACAATTGCCGCCCCGGCATGCGCCCAGGACGAGCCGATCTACGCACC CTGCGTAACCCGGTTTCCGGCGCCGGAGGAGTTCGGGACAGGTGGCGCGTTCACCGCTGCGCTTGAGGCGCAGGGTTGGG TGATGCAGACCTCTGACGCCGCGCGGCTGGCTGCGGCGGCACCGCTGGCGGACATCGAGGCTCTGGTGTTTGCGCCCGAT GCGTTTGCGGACGCTGCGGACGCTCTCGACTATGCCAGTCGAGCGATGACCCGATACGAACCTCAAATGGTGTTCATCGA GATCTTCACGCGCGCCGGTCTCTCGGCCTCGCTCTCTGCTGTCGAGTTGGACCCCGGATATGTCACGGTAAGGTGCACAT TTGCCGGGCCAGAGGTTCCGTCCGTCAAGGATTTTCTGGACACGGATCGGGTGCTTGCCGACGGCTCCGCCGCGCGGGTC CGTCTGATCCCGCAGGACACGCCTGATGGTGTTGTCACCTACAGCATCGTCGCCTTCCAGTTCGATGGCGACGATACGAC CCTTGCCCCCATTACCGGGCGGGAGGGGCTTCAAACGAGTTTCATCTATCGGGTGCCGGAATGA
Upstream 100 bases:
>100_bases TTCTGTCCGGCATCCAGATGCTGCCAAGCCTGCTGGTTATCATCTGGATGGCCAGCAAAGGCACCGACGGCCCAAACCGA TATGGGGAGGATCCCTTGGC
Downstream 100 bases:
>100_bases CTCAGACCCCGCCCCGCCCAAGTGCAATATCCCCCCTCAACCGAGGATTTAAGCCATGAATGACCAATCTCCCAACGATA CCTTCCATGCCTCCAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE
Sequences:
>Translated_207_residues MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE >Mature_207_residues MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDAARLAAAAPLADIEALVFAPD AFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSAVELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARV RLIPQDTPDGVVTYSIVAFQFDGDDTTLAPITGREGLQTSFIYRVPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21995; Mature: 21995
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDA CCHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCHHCCCCCEEEEEEECCCEEEECCCH ARLAAAAPLADIEALVFAPDAFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSA HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCEE VELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARVRLIPQDTPDGVVTYSIVAFQ EEECCCEEEEEEEECCCCCCCHHHHHCCCCEEECCCCEEEEECCCCCCCCEEEEEEEEEE FDGDDTTLAPITGREGLQTSFIYRVPE ECCCCCEEEEECCCCCCCEEEEEECCC >Mature Secondary Structure MRPIVFALAICTIAAPACAQDEPIYAPCVTRFPAPEEFGTGGAFTAALEAQGWVMQTSDA CCHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCCHHCCCCCEEEEEEECCCEEEECCCH ARLAAAAPLADIEALVFAPDAFADAADALDYASRAMTRYEPQMVFIEIFTRAGLSASLSA HHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCEE VELDPGYVTVRCTFAGPEVPSVKDFLDTDRVLADGSAARVRLIPQDTPDGVVTYSIVAFQ EEECCCEEEEEEEECCCCCCCHHHHHCCCCEEECCCCEEEEECCCCCCCCEEEEEEEEEE FDGDDTTLAPITGREGLQTSFIYRVPE ECCCCCEEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA