Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yhaH [C]

Identifier: 89053320

GI number: 89053320

Start: 783854

End: 784438

Strand: Direct

Name: yhaH [C]

Synonym: Jann_0829

Alternate gene names: 89053320

Gene position: 783854-784438 (Clockwise)

Preceding gene: 89053319

Following gene: 89053321

Centisome position: 18.15

GC content: 55.04

Gene sequence:

>585_bases
ATGACCTTCACCCAAGCCATCCGCAGCAACATCGTCGAGTGCCTGAACTTCCAGGACAGGTCCCCGCGCTCGGCCTATTG
GTGGTATGTGCTGTTCATCACGCTCGGCTCCTTGGTGACGTTCCTGCTCGACTTCCTGATCTTCTGGCCGTCGATGGACG
ATGTGCTGCCATTCCTTGCGGAAAACTTTGGCTCCATCAGTGATTTCTACATCAACGTGATGCCGATCACGACGTTCTGG
TATCTGCTCAACTACCTGCCAATCCTGGCTGTGGGCGTGCGCCGGATGCACGATTGTGACCGCCCGGGATGGTGGTACAT
CGTCACCGTGATTTTCGTCACAGTGATGTCATTTGTGGTTTTTCAGATAACGGCCCCACAATCGGCCGAGATGATGACCG
TCGCATTCAACCCCAATGTCACGATGGCGGAGTTGGATGCCATGTTGGTGCGTATGAATGAGTTGAACGCAACTTCCTCG
ATTCTGTCCGGCATCCAGATGCTGCCAAGCCTGCTGGTTATCATCTGGATGGCCAGCAAAGGCACCGACGGCCCAAACCG
ATATGGGGAGGATCCCTTGGCATGA

Upstream 100 bases:

>100_bases
CCGCGGAAGATGATGGGACGTTTGCCACGTGGTTTCCGCAGATCGTGGAGGTTGTGCAAACCTGCCATTTGGCGTTCCTG
AACCGTCCGGAGGCGGGGCA

Downstream 100 bases:

>100_bases
GACCTATCGTGTTTGCCCTAGCCATTTGCACAATTGCCGCCCCGGCATGCGCCCAGGACGAGCCGATCTACGCACCCTGC
GTAACCCGGTTTCCGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MTFTQAIRSNIVECLNFQDRSPRSAYWWYVLFITLGSLVTFLLDFLIFWPSMDDVLPFLAENFGSISDFYINVMPITTFW
YLLNYLPILAVGVRRMHDCDRPGWWYIVTVIFVTVMSFVVFQITAPQSAEMMTVAFNPNVTMAELDAMLVRMNELNATSS
ILSGIQMLPSLLVIIWMASKGTDGPNRYGEDPLA

Sequences:

>Translated_194_residues
MTFTQAIRSNIVECLNFQDRSPRSAYWWYVLFITLGSLVTFLLDFLIFWPSMDDVLPFLAENFGSISDFYINVMPITTFW
YLLNYLPILAVGVRRMHDCDRPGWWYIVTVIFVTVMSFVVFQITAPQSAEMMTVAFNPNVTMAELDAMLVRMNELNATSS
ILSGIQMLPSLLVIIWMASKGTDGPNRYGEDPLA
>Mature_193_residues
TFTQAIRSNIVECLNFQDRSPRSAYWWYVLFITLGSLVTFLLDFLIFWPSMDDVLPFLAENFGSISDFYINVMPITTFWY
LLNYLPILAVGVRRMHDCDRPGWWYIVTVIFVTVMSFVVFQITAPQSAEMMTVAFNPNVTMAELDAMLVRMNELNATSSI
LSGIQMLPSLLVIIWMASKGTDGPNRYGEDPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22197; Mature: 22066

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTQAIRSNIVECLNFQDRSPRSAYWWYVLFITLGSLVTFLLDFLIFWPSMDDVLPFLA
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ENFGSISDFYINVMPITTFWYLLNYLPILAVGVRRMHDCDRPGWWYIVTVIFVTVMSFVV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FQITAPQSAEMMTVAFNPNVTMAELDAMLVRMNELNATSSILSGIQMLPSLLVIIWMASK
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTDGPNRYGEDPLA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TFTQAIRSNIVECLNFQDRSPRSAYWWYVLFITLGSLVTFLLDFLIFWPSMDDVLPFLA
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ENFGSISDFYINVMPITTFWYLLNYLPILAVGVRRMHDCDRPGWWYIVTVIFVTVMSFVV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FQITAPQSAEMMTVAFNPNVTMAELDAMLVRMNELNATSSILSGIQMLPSLLVIIWMASK
HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTDGPNRYGEDPLA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA