Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053317
Identifier: 89053317
GI number: 89053317
Start: 781977
End: 782522
Strand: Direct
Name: 89053317
Synonym: Jann_0826
Alternate gene names: NA
Gene position: 781977-782522 (Clockwise)
Preceding gene: 89053316
Following gene: 89053318
Centisome position: 18.11
GC content: 61.72
Gene sequence:
>546_bases ATGACCCAGGTGGATACCAGCCAACGGCTGACGATTTTCCCAAGGGCGATTGGCTGGAAAATGTTGCTGGGATGTGCGGC CATTGTGGCGGGCAGCTTGGCGATTGTGCCCTTTGCGTGGGTCGATCAGGCGTGGCCGATTGTCTGGCTCAGCGCGGGGT TTGGCACATTCATGCTGGTTCTCCTTGTGCTGTTGATCCGCAAGCGGGCGCGGGGCACTCCGGACCCGGCTTTGATGCTT ACGCCCGAGGGGTTGCACTTTCTGACCGGCACGGTCGGCGTCGTGCCATGGCGCGACGTGCGCAGTCTTGGATCGTTTGC CGTGAAGGGCAACCAGGCGTTGGTGATCAACGTCGAGAAGGCGGCCATCGCCAGGCTGGACCAGGGCAAGTTCTTCAAGA CCAGTCGCAAGCTGGACGCCGCAATCGGCATCCACGGTCTGACATTCTTCCAACAACAGCTGGAGCTTCCGATCCCCGAG GTCGCGCGCCTGCTGCACCAATATTCTCTCGCCCATGGCGGGCCTGCATTGCAGCCCGATCCCTGA
Upstream 100 bases:
>100_bases TCACGTGGGCACACGTCCGGGCCCCCGAGGGGTCGAGACCTTCATGTTCGTGGAGCGGATGACCCCGCTGGAGCCAGTGG AATGAGGGGGCGGGCCGCAT
Downstream 100 bases:
>100_bases TCAAGGCCATGACCCAACCCATATCCCAAACGACCACAGGAGGCCCCGATGGCCGTACTCGTTGATGAAAATACCAAGGT GATTTGCCAAGGCTTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTQVDTSQRLTIFPRAIGWKMLLGCAAIVAGSLAIVPFAWVDQAWPIVWLSAGFGTFMLVLLVLLIRKRARGTPDPALML TPEGLHFLTGTVGVVPWRDVRSLGSFAVKGNQALVINVEKAAIARLDQGKFFKTSRKLDAAIGIHGLTFFQQQLELPIPE VARLLHQYSLAHGGPALQPDP
Sequences:
>Translated_181_residues MTQVDTSQRLTIFPRAIGWKMLLGCAAIVAGSLAIVPFAWVDQAWPIVWLSAGFGTFMLVLLVLLIRKRARGTPDPALML TPEGLHFLTGTVGVVPWRDVRSLGSFAVKGNQALVINVEKAAIARLDQGKFFKTSRKLDAAIGIHGLTFFQQQLELPIPE VARLLHQYSLAHGGPALQPDP >Mature_180_residues TQVDTSQRLTIFPRAIGWKMLLGCAAIVAGSLAIVPFAWVDQAWPIVWLSAGFGTFMLVLLVLLIRKRARGTPDPALMLT PEGLHFLTGTVGVVPWRDVRSLGSFAVKGNQALVINVEKAAIARLDQGKFFKTSRKLDAAIGIHGLTFFQQQLELPIPEV ARLLHQYSLAHGGPALQPDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19733; Mature: 19601
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVDTSQRLTIFPRAIGWKMLLGCAAIVAGSLAIVPFAWVDQAWPIVWLSAGFGTFMLV CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCCEEEEECCHHHHHHH LLVLLIRKRARGTPDPALMLTPEGLHFLTGTVGVVPWRDVRSLGSFAVKGNQALVINVEK HHHHHHHHHCCCCCCCEEEECCCCCEEHHCCCCCCCCHHHHHHHCEEECCCCEEEEEEHH AAIARLDQGKFFKTSRKLDAAIGIHGLTFFQQQLELPIPEVARLLHQYSLAHGGPALQPD HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC P C >Mature Secondary Structure TQVDTSQRLTIFPRAIGWKMLLGCAAIVAGSLAIVPFAWVDQAWPIVWLSAGFGTFMLV CCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHEEHHHHHCCCCCEEEEECCHHHHHHH LLVLLIRKRARGTPDPALMLTPEGLHFLTGTVGVVPWRDVRSLGSFAVKGNQALVINVEK HHHHHHHHHCCCCCCCEEEECCCCCEEHHCCCCCCCCHHHHHHHCEEECCCCEEEEEEHH AAIARLDQGKFFKTSRKLDAAIGIHGLTFFQQQLELPIPEVARLLHQYSLAHGGPALQPD HHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA