Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053294
Identifier: 89053294
GI number: 89053294
Start: 764910
End: 765593
Strand: Direct
Name: 89053294
Synonym: Jann_0803
Alternate gene names: NA
Gene position: 764910-765593 (Clockwise)
Preceding gene: 89053291
Following gene: 89053308
Centisome position: 17.71
GC content: 66.81
Gene sequence:
>684_bases GTGACGGACTGGGCCGAGAGTGCAAATGACGGGCCGCCGATGCGGTTGGCGCAACGCTATGATGCGGAGCGGTTCCTGCC CGATCCCGGCAACACGGTGGTGTGCCATCTGGACCTGGACAGCCCCGGTGGCGCGGCGGTGCTGCGGGCGCGGGCGGCGA TGAAGGCCTTGCCGGGGGCCGATCGGCTGTTGTTCACACCCGAGGACAGCCTGCATATGACCGTGTTTGAGGGGGTCCTG GACGCGCGACGCAGGCCGAACGCCTGGCCGTCATTCGTGGATGTTGCCGCGCCGGTGGCGCATGTGACAGAGGCGATGCG TGTGCGTTTGGACGGGTTTGAGGGGCCGGGCGCGTTTGAGGTGGCGGTGGCTGCGGTGCGACCCGGTGGGATGGAGCTGC GCGGCGCCACTGACGGCGATGTGGCGGCCCTCCTGACTTGGCGCGAGGCGTTGAGTGGCGCGTTTGGTTACCGTCAGACA GAGCATGACGCCTACCGGCACCACATGACCTTTGCCTATCCGCTGGACTGGCTGCCCGATGATCTGGTGCCGATGTGGCA GCAGGGGCTGGCGGAGATCGAGGCAGACCTGATGTCGGCCGCGCCGTTGCTGCCGCTTCGGGCCCCTGCGTTTTGTCAGT TCGCGGATATGACGCACTTTGAGGAATTGGTCGCGCTGGGATAA
Upstream 100 bases:
>100_bases GTGGGGCGGTGGGGAAGCTTTGGGGCGGCGGTTGGGCATGGGCGTCTCCGATCATTGCGGCTACGATACGCGGGCAGCAA AGGGGTGCAAGGCGATGAAG
Downstream 100 bases:
>100_bases GCGCCGGGATGTCGTCGGCACGACGTCACCGGCCAATGGGTTGCGGGCGAATTCGCCCATGAGGGGAATGGTCTTCGGCC ACGCTCATGAAAGGCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTDWAESANDGPPMRLAQRYDAERFLPDPGNTVVCHLDLDSPGGAAVLRARAAMKALPGADRLLFTPEDSLHMTVFEGVL DARRRPNAWPSFVDVAAPVAHVTEAMRVRLDGFEGPGAFEVAVAAVRPGGMELRGATDGDVAALLTWREALSGAFGYRQT EHDAYRHHMTFAYPLDWLPDDLVPMWQQGLAEIEADLMSAAPLLPLRAPAFCQFADMTHFEELVALG
Sequences:
>Translated_227_residues MTDWAESANDGPPMRLAQRYDAERFLPDPGNTVVCHLDLDSPGGAAVLRARAAMKALPGADRLLFTPEDSLHMTVFEGVL DARRRPNAWPSFVDVAAPVAHVTEAMRVRLDGFEGPGAFEVAVAAVRPGGMELRGATDGDVAALLTWREALSGAFGYRQT EHDAYRHHMTFAYPLDWLPDDLVPMWQQGLAEIEADLMSAAPLLPLRAPAFCQFADMTHFEELVALG >Mature_226_residues TDWAESANDGPPMRLAQRYDAERFLPDPGNTVVCHLDLDSPGGAAVLRARAAMKALPGADRLLFTPEDSLHMTVFEGVLD ARRRPNAWPSFVDVAAPVAHVTEAMRVRLDGFEGPGAFEVAVAAVRPGGMELRGATDGDVAALLTWREALSGAFGYRQTE HDAYRHHMTFAYPLDWLPDDLVPMWQQGLAEIEADLMSAAPLLPLRAPAFCQFADMTHFEELVALG
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24798; Mature: 24667
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDWAESANDGPPMRLAQRYDAERFLPDPGNTVVCHLDLDSPGGAAVLRARAAMKALPGA CCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC DRLLFTPEDSLHMTVFEGVLDARRRPNAWPSFVDVAAPVAHVTEAMRVRLDGFEGPGAFE CEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE VAVAAVRPGGMELRGATDGDVAALLTWREALSGAFGYRQTEHDAYRHHMTFAYPLDWLPD EEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCCC DLVPMWQQGLAEIEADLMSAAPLLPLRAPAFCQFADMTHFEELVALG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDWAESANDGPPMRLAQRYDAERFLPDPGNTVVCHLDLDSPGGAAVLRARAAMKALPGA CCCCCCCCCCCCHHHHHHCCHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC DRLLFTPEDSLHMTVFEGVLDARRRPNAWPSFVDVAAPVAHVTEAMRVRLDGFEGPGAFE CEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE VAVAAVRPGGMELRGATDGDVAALLTWREALSGAFGYRQTEHDAYRHHMTFAYPLDWLPD EEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCCC DLVPMWQQGLAEIEADLMSAAPLLPLRAPAFCQFADMTHFEELVALG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA