Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053271

Identifier: 89053271

GI number: 89053271

Start: 739730

End: 740752

Strand: Direct

Name: 89053271

Synonym: Jann_0780

Alternate gene names: NA

Gene position: 739730-740752 (Clockwise)

Preceding gene: 89053262

Following gene: 89053275

Centisome position: 17.13

GC content: 64.42

Gene sequence:

>1023_bases
ATGCCCACCGTCGTCGTCTACCGAATTAGCGCCGATCCCCTGGGCACCGCGGATGTCACAATCCTTGAAGAATATGTCGT
GGATATCGTCGATGCGGACGATCCGCTTCTGGAAGGGTCCGACGCCACCGGCCCGCAGCTGGACGTGACCGATCTGCCCC
CCGGGTTTTTGGGCGATTCCACCACATTTCAGACGTTTGAAACCTATAGCGGCTCGCTGGGGGGATCGACGGTATCGTTC
ACGCTGATCCAGTTTTCCAACCCGGTGCTGATCATCGCGACCGCAGGCACGTTTGACGTGGGCGATACGATCACCGGCAC
CGGCAGCACCATCGTGACCGCGCCGCCAACCGACTACGAGGATCTGCCGGATTACGTCTGTTTCACCGCGGGCTCATTGA
TCGAGACCCCCTCTGGCCCCCGCCGGATCGAAAATTTGCAACGCGGTGATCTGGTCCTGACAGCCGAGGGGATGGCCAAG
CCCGTGCAATGGATCGGCCAGCGCCACCTGAGTGCGCGGGACATTGCGCAAAGCCCGCATCTCAGCCCCGTGGTGATTGC
CGCCGATGCCCTCGGGCCGGGGATGCCAGCGCGGGAGTTGCGCGTCTCTCCACAACACCGCCTCGCGCTCAGCACCGGGG
CCAGTGGGATCGTGCTTGGGGCCGACGCGGTGCTGGCGGCGGCGTTGCACATGACGCCACGTGACAGGATCGACGTTGAA
CCGATGCCGCGCGCCGTGGATTACGTGCATATCCTGCTGGACGGCCACGGGCTGGTGAAGGTGGAGGGCCTCTGGGCCGA
GACGTTGTTTCTGGGCGAAATGGCGCTGCAAACCCTCTCGCGCGACGGGCTTGCGGAATTTGAGGCACTGTTTCCCGATA
ATGACCTGTCCGCCGTGCCCGCCATGGCCACCTGCCTGCCGGTTATCACCAAGCATGAGGCCCGCGTGGCCATTGACGAT
CTGCGCGCGTTCCGGCCGGATGCCATCGGGTCGGGCCACCCCAAACCCCCCTGGGCCGCGTGA

Upstream 100 bases:

>100_bases
ACACGCAATCGGCACAGAATAGGCACAGTCTTCGGGTATTGTTATACTCCACCAGAGCCATCGATTCCTTGCCGCACCCT
CAGGAACCACGGACAGATCC

Downstream 100 bases:

>100_bases
CACCGCCCCGGCCTTGATCCTTGGGCGGGGCCCCTGCGCAGGTCCCTCAGTCCGCGTCCAGCGTCACGCCATCGGTCTCG
ATCCCGTCGGCAACCTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPTVVVYRISADPLGTADVTILEEYVVDIVDADDPLLEGSDATGPQLDVTDLPPGFLGDSTTFQTFETYSGSLGGSTVSF
TLIQFSNPVLIIATAGTFDVGDTITGTGSTIVTAPPTDYEDLPDYVCFTAGSLIETPSGPRRIENLQRGDLVLTAEGMAK
PVQWIGQRHLSARDIAQSPHLSPVVIAADALGPGMPARELRVSPQHRLALSTGASGIVLGADAVLAAALHMTPRDRIDVE
PMPRAVDYVHILLDGHGLVKVEGLWAETLFLGEMALQTLSRDGLAEFEALFPDNDLSAVPAMATCLPVITKHEARVAIDD
LRAFRPDAIGSGHPKPPWAA

Sequences:

>Translated_340_residues
MPTVVVYRISADPLGTADVTILEEYVVDIVDADDPLLEGSDATGPQLDVTDLPPGFLGDSTTFQTFETYSGSLGGSTVSF
TLIQFSNPVLIIATAGTFDVGDTITGTGSTIVTAPPTDYEDLPDYVCFTAGSLIETPSGPRRIENLQRGDLVLTAEGMAK
PVQWIGQRHLSARDIAQSPHLSPVVIAADALGPGMPARELRVSPQHRLALSTGASGIVLGADAVLAAALHMTPRDRIDVE
PMPRAVDYVHILLDGHGLVKVEGLWAETLFLGEMALQTLSRDGLAEFEALFPDNDLSAVPAMATCLPVITKHEARVAIDD
LRAFRPDAIGSGHPKPPWAA
>Mature_339_residues
PTVVVYRISADPLGTADVTILEEYVVDIVDADDPLLEGSDATGPQLDVTDLPPGFLGDSTTFQTFETYSGSLGGSTVSFT
LIQFSNPVLIIATAGTFDVGDTITGTGSTIVTAPPTDYEDLPDYVCFTAGSLIETPSGPRRIENLQRGDLVLTAEGMAKP
VQWIGQRHLSARDIAQSPHLSPVVIAADALGPGMPARELRVSPQHRLALSTGASGIVLGADAVLAAALHMTPRDRIDVEP
MPRAVDYVHILLDGHGLVKVEGLWAETLFLGEMALQTLSRDGLAEFEALFPDNDLSAVPAMATCLPVITKHEARVAIDDL
RAFRPDAIGSGHPKPPWAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35996; Mature: 35865

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVVVYRISADPLGTADVTILEEYVVDIVDADDPLLEGSDATGPQLDVTDLPPGFLGDS
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
TTFQTFETYSGSLGGSTVSFTLIQFSNPVLIIATAGTFDVGDTITGTGSTIVTAPPTDYE
CCEEEHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH
DLPDYVCFTAGSLIETPSGPRRIENLQRGDLVLTAEGMAKPVQWIGQRHLSARDIAQSPH
HCCCCEECCCCCCEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCC
LSPVVIAADALGPGMPARELRVSPQHRLALSTGASGIVLGADAVLAAALHMTPRDRIDVE
CCEEEEEECCCCCCCCHHHEECCCCCEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCC
PMPRAVDYVHILLDGHGLVKVEGLWAETLFLGEMALQTLSRDGLAEFEALFPDNDLSAVP
CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHH
AMATCLPVITKHEARVAIDDLRAFRPDAIGSGHPKPPWAA
HHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTVVVYRISADPLGTADVTILEEYVVDIVDADDPLLEGSDATGPQLDVTDLPPGFLGDS
CEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
TTFQTFETYSGSLGGSTVSFTLIQFSNPVLIIATAGTFDVGDTITGTGSTIVTAPPTDYE
CCEEEHHHCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCHH
DLPDYVCFTAGSLIETPSGPRRIENLQRGDLVLTAEGMAKPVQWIGQRHLSARDIAQSPH
HCCCCEECCCCCCEECCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCC
LSPVVIAADALGPGMPARELRVSPQHRLALSTGASGIVLGADAVLAAALHMTPRDRIDVE
CCEEEEEECCCCCCCCHHHEECCCCCEEEEECCCCEEEECHHHHHHHHHHCCCCCCCCCC
PMPRAVDYVHILLDGHGLVKVEGLWAETLFLGEMALQTLSRDGLAEFEALFPDNDLSAVP
CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHH
AMATCLPVITKHEARVAIDDLRAFRPDAIGSGHPKPPWAA
HHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA