Click here to switch to the map view.

The map label for this gene is 89053226

Identifier: 89053226

GI number: 89053226

Start: 705396

End: 705959

Strand: Direct

Name: 89053226

Synonym: Jann_0735

Alternate gene names: NA

Gene position: 705396-705959 (Clockwise)

Preceding gene: 89053225

Following gene: 89053227

Centisome position: 16.34

GC content: 56.38

Gene sequence:

>564_bases
ATGAGACGACCAATGAACCTGACAACCTTGCAGCAGGAATTCGTCCTGCACTTCGGAGAAATGGGCAGCCGGTGGGGGAT
AAACCGCACCGTGGGGCAGATCTATGCGCTGCTGTTTTTGTCCTCTACGCCGCTCAACGCTGAGCAGATCACGGAAGGTC
TGGGTGTGAGCCGATCCAACACATCGATGGGATTGAAGGAACTTCAGGCTTGGAATCTCGTGCGCCTGCGCCATGTCCCG
AACGACAGACGGGATTATTTCACCACGCCGGAGGATCTATGGGAGATCACGCGCATTCTGATCGCAGAACGCAAGAAGCG
CGAAATTGACCCGACCTTAACGAAACTACGCGAGTTGGAGATGGCTGGCCCCGCAGGTGACGACTACGCCGAGGCCCGCA
TCGCCGAGTTGCGGGAAATGATTGAGCTGATGACCGGCTTCTATGACGACATGGAAAAGCTGGAGACAGAACGGCTCGTG
AAGATGATGACATTGGGCAGCAAGATCGCCGGTTTGGTCGACAAGGCCAGCGGTGCTTTCGCCCTGACGAAGCGGAAAGG
ATAG

Upstream 100 bases:

>100_bases
CACGATCAGAGCGCAGGAATGTCGCACCCTGTCGCATTGCCTTCGCGGCGCTGCGCTTTATATCAATTTCAGAAATTACT
GAAATATCAGACACGCGCAA

Downstream 100 bases:

>100_bases
ACCGATGGAAGGTCTCGACACCCTCATTCTCAGCCGCATTCAGTTTGCGGCCAATATCTCGTTCCACATCCTGTTCCCGA
CGATCACGATCGCTTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRRPMNLTTLQQEFVLHFGEMGSRWGINRTVGQIYALLFLSSTPLNAEQITEGLGVSRSNTSMGLKELQAWNLVRLRHVP
NDRRDYFTTPEDLWEITRILIAERKKREIDPTLTKLRELEMAGPAGDDYAEARIAELREMIELMTGFYDDMEKLETERLV
KMMTLGSKIAGLVDKASGAFALTKRKG

Sequences:

>Translated_187_residues
MRRPMNLTTLQQEFVLHFGEMGSRWGINRTVGQIYALLFLSSTPLNAEQITEGLGVSRSNTSMGLKELQAWNLVRLRHVP
NDRRDYFTTPEDLWEITRILIAERKKREIDPTLTKLRELEMAGPAGDDYAEARIAELREMIELMTGFYDDMEKLETERLV
KMMTLGSKIAGLVDKASGAFALTKRKG
>Mature_187_residues
MRRPMNLTTLQQEFVLHFGEMGSRWGINRTVGQIYALLFLSSTPLNAEQITEGLGVSRSNTSMGLKELQAWNLVRLRHVP
NDRRDYFTTPEDLWEITRILIAERKKREIDPTLTKLRELEMAGPAGDDYAEARIAELREMIELMTGFYDDMEKLETERLV
KMMTLGSKIAGLVDKASGAFALTKRKG

Specific function: Unknown

COG id: COG1510

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 21381; Mature: 21381

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPMNLTTLQQEFVLHFGEMGSRWGINRTVGQIYALLFLSSTPLNAEQITEGLGVSRSN
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
TSMGLKELQAWNLVRLRHVPNDRRDYFTTPEDLWEITRILIAERKKREIDPTLTKLRELE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MAGPAGDDYAEARIAELREMIELMTGFYDDMEKLETERLVKMMTLGSKIAGLVDKASGAF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ALTKRKG
EECCCCC
>Mature Secondary Structure
MRRPMNLTTLQQEFVLHFGEMGSRWGINRTVGQIYALLFLSSTPLNAEQITEGLGVSRSN
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
TSMGLKELQAWNLVRLRHVPNDRRDYFTTPEDLWEITRILIAERKKREIDPTLTKLRELE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
MAGPAGDDYAEARIAELREMIELMTGFYDDMEKLETERLVKMMTLGSKIAGLVDKASGAF
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ALTKRKG
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 12471609 [H]