Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is cmk

Identifier: 89053206

GI number: 89053206

Start: 686079

End: 686693

Strand: Direct

Name: cmk

Synonym: Jann_0715

Alternate gene names: 89053206

Gene position: 686079-686693 (Clockwise)

Preceding gene: 89053205

Following gene: 89053207

Centisome position: 15.89

GC content: 67.32

Gene sequence:

>615_bases
ATGAGATTTACTGTTGCCATTGATGGGCCTGCCGCGGCGGGCAAGGGAACGATCGGCCGTGCTGTGGCTGATGCATTCGG
GTTCGGGCACCTGGACACGGGGTTGTTGTACCGCGCCGTGGGTGCTCGCGTGTTACGGGGGGAGCGGGCCGAGGAGGCAG
CCCTTGCCTTGACGCCAGACGACCTCGCCCATCCGGATGCGCTTCGCACGCCCGATGTGGCGCAAGCGGCCTCCAAGGTC
GCGGTGATCCCCGAGGTCCGCGATGCCCTGCTGGAGTTTCAACGCGCGTTCGCCCACCGCATCGGCGGTGCGGTGCTGGA
CGGGCGCGACATCGGCACCGTGATTTGTCCCCGTGCGGAGGTAAAACTGTTCGTGACGGCCAGTGCCGAGGTTCGTGCCA
GGCGCCGCATGGACGAGCTGACGGGCCGAGGGCTGGAGGCCGACTATGACACCGTCCTGGCCGATGTGCGCGCCCGCGAT
GCCCGCGATGCGGACCGCGCCACGGCCCCGATGACGGCCGCAGACGATGCCCTGACGCTTGATACAAGTGAAATGTCGGC
AGAGGCCGCGATTGCCGCCGCGATTGCTGCCGTGAAGGCGAAACGTGGCGATTGA

Upstream 100 bases:

>100_bases
AGATGATCCTGGCCGCCAGCACCGCGACGGTCGCGAAATACGGAGCCTTGATGGTCAGCGTGATTGCACTAGGGGCCGCA
TTTGTGACAACCAGAACCCC

Downstream 100 bases:

>100_bases
GACGGCGCAGCTGATCGTCACGCGAGAGGGCGGATATGCCGATTACTTGCGCGCCTACCGCATCCTTGTTGATGATATCG
AGATGGGTCGGATCAAACGC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV
AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD
ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD

Sequences:

>Translated_204_residues
MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV
AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD
ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD
>Mature_204_residues
MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPDDLAHPDALRTPDVAQAASKV
AVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAEVKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARD
ARDADRATAPMTAADDALTLDTSEMSAEAAIAAAIAAVKAKRGD

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=219, Percent_Identity=39.2694063926941, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 21377; Mature: 21377

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPD
CEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCH
DLAHPDALRTPDVAQAASKVAVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAE
HHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCC
VKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARDARDADRATAPMTAADDALTL
EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEE
DTSEMSAEAAIAAAIAAVKAKRGD
CHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFTVAIDGPAAAGKGTIGRAVADAFGFGHLDTGLLYRAVGARVLRGERAEEAALALTPD
CEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCH
DLAHPDALRTPDVAQAASKVAVIPEVRDALLEFQRAFAHRIGGAVLDGRDIGTVICPRAE
HHCCCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCC
VKLFVTASAEVRARRRMDELTGRGLEADYDTVLADVRARDARDADRATAPMTAADDALTL
EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEE
DTSEMSAEAAIAAAIAAVKAKRGD
CHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA