Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is metK
Identifier: 89053197
GI number: 89053197
Start: 678196
End: 679377
Strand: Direct
Name: metK
Synonym: Jann_0706
Alternate gene names: 89053197
Gene position: 678196-679377 (Clockwise)
Preceding gene: 89053196
Following gene: 89053198
Centisome position: 15.71
GC content: 63.2
Gene sequence:
>1182_bases ATGGCGCGTAACAATTATCTTTTCACCTCGGAATCCGTGTCCGAAGGGCATCCCGACAAAGTCTGTGACCGGATCTCGGA CGCGATCTTGGACGCCTTCCTGTCGGAAGAGCCTGAGGCGCGCGTGGCCTGCGAGACCTTCGCCACCACCAACCGCGTTG TGATCGGCGGTGAAGTGGGTCTGAGCGATCAGGACAAGCTGGCCGAATACATGGGCCAAGTGGACCCAATCGTGCGCGCC TGCGTCAAGGACATCGGCTATGAGCAGGACAAGTTCCACCACGAGACCGTGGAAATCACCAACCTGTTGCACGAGCAATC GGCCCATATCGCACAAGGTGTCGATGCGGCGGAGAACAAGGACGAAGGGGCTGGCGATCAAGGGATCATGTTCGGTTTTG CCGTGGCAGAGACGCCTGAGTTGATGCCAGCGCCGATCCACTATGCCCACGCGATCCTCAAGAAACTGGCCGAGGTCCGC AAATCCGGTGAGCAGGCGGTGCTTGGCCCCGACGCCAAGTCGCAACTCTCGGTGCGGTACGAGGATGGCACGCCCGTCGG CGTCTCTTCCATCGTGTTGTCGACCCAGCATCTCGACGAGAGCCTGACGTCTGATGACGTGCGCGCCATCGTGGAGCCCT ACATTCGCGGTGAGCTGCCCGATGGCTGGATCAGTGCCGAGACGGAATGGCACGTGAACCCCACAGGCAAGTTCGTGATC GGCGGACCCGATGGCGATGCGGGCCTGACGGGCCGCAAGATCATCGTGGACACCTATGGCGGCGCGGCGCCCCATGGGGG CGGTGCGTTTTCCGGCAAAGATCCGACCAAGGTGGACCGCTCGGCGGCCTACGCGTCGCGCTATCTGGCGAAGAATGTGG TGGCGGCAGGCCTCGCGCATCGGTGCACGATCCAGCTCAGCTACGCGATCGGCGTGGCCAAGCCCCTGTCGATCTATTGC GACACGCACCAGACCGGGCAGGTCCACGAGGCTGAGATTGAGCGCGCTTTGGGCCAGGTCATGGACCTGACACCGCGCGG CATCCGCACGCATCTGGGCATGAACCGCCCCATCTATGAACGCACGGCGGCCTATGGCCACTTCGGCCGCGCGGCAGAGG CCGATGGCGGGTTCTCGTGGGAAAAGACGGATCTGGCGGACGCGATCAAGGCGGCGCTCTAG
Upstream 100 bases:
>100_bases TCCACACCCCATTGAATGCGGTGCAAAACGCGCGTATGCGACACCCGACTCCTCCACAACGGCTTCCTGACGTGGGGGAT TATTTGAATGGAGCATTCCC
Downstream 100 bases:
>100_bases GGCCGACTATCGCCACTTTGGCCTACAGTGATAAACTCCGGCTCTGACCCGTTTTGATCCGCCATGTGCCGGGCTTTTCC GTTGGCCGATCTCCAGCTCG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MARNNYLFTSESVSEGHPDKVCDRISDAILDAFLSEEPEARVACETFATTNRVVIGGEVGLSDQDKLAEYMGQVDPIVRA CVKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVDAAENKDEGAGDQGIMFGFAVAETPELMPAPIHYAHAILKKLAEVR KSGEQAVLGPDAKSQLSVRYEDGTPVGVSSIVLSTQHLDESLTSDDVRAIVEPYIRGELPDGWISAETEWHVNPTGKFVI GGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYASRYLAKNVVAAGLAHRCTIQLSYAIGVAKPLSIYC DTHQTGQVHEAEIERALGQVMDLTPRGIRTHLGMNRPIYERTAAYGHFGRAAEADGGFSWEKTDLADAIKAAL
Sequences:
>Translated_393_residues MARNNYLFTSESVSEGHPDKVCDRISDAILDAFLSEEPEARVACETFATTNRVVIGGEVGLSDQDKLAEYMGQVDPIVRA CVKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVDAAENKDEGAGDQGIMFGFAVAETPELMPAPIHYAHAILKKLAEVR KSGEQAVLGPDAKSQLSVRYEDGTPVGVSSIVLSTQHLDESLTSDDVRAIVEPYIRGELPDGWISAETEWHVNPTGKFVI GGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYASRYLAKNVVAAGLAHRCTIQLSYAIGVAKPLSIYC DTHQTGQVHEAEIERALGQVMDLTPRGIRTHLGMNRPIYERTAAYGHFGRAAEADGGFSWEKTDLADAIKAAL >Mature_392_residues ARNNYLFTSESVSEGHPDKVCDRISDAILDAFLSEEPEARVACETFATTNRVVIGGEVGLSDQDKLAEYMGQVDPIVRAC VKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVDAAENKDEGAGDQGIMFGFAVAETPELMPAPIHYAHAILKKLAEVRK SGEQAVLGPDAKSQLSVRYEDGTPVGVSSIVLSTQHLDESLTSDDVRAIVEPYIRGELPDGWISAETEWHVNPTGKFVIG GPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYASRYLAKNVVAAGLAHRCTIQLSYAIGVAKPLSIYCD THQTGQVHEAEIERALGQVMDLTPRGIRTHLGMNRPIYERTAAYGHFGRAAEADGGFSWEKTDLADAIKAAL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=385, Percent_Identity=49.0909090909091, Blast_Score=329, Evalue=2e-90, Organism=Homo sapiens, GI4557737, Length=385, Percent_Identity=48.3116883116883, Blast_Score=324, Evalue=7e-89, Organism=Escherichia coli, GI1789311, Length=390, Percent_Identity=52.8205128205128, Blast_Score=398, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25145633, Length=389, Percent_Identity=48.0719794344473, Blast_Score=334, Evalue=5e-92, Organism=Caenorhabditis elegans, GI17538498, Length=390, Percent_Identity=48.4615384615385, Blast_Score=333, Evalue=1e-91, Organism=Caenorhabditis elegans, GI17538494, Length=390, Percent_Identity=48.2051282051282, Blast_Score=333, Evalue=1e-91, Organism=Caenorhabditis elegans, GI17551082, Length=387, Percent_Identity=46.5116279069767, Blast_Score=314, Evalue=4e-86, Organism=Caenorhabditis elegans, GI32565905, Length=388, Percent_Identity=44.5876288659794, Blast_Score=295, Evalue=2e-80, Organism=Caenorhabditis elegans, GI32565911, Length=314, Percent_Identity=48.0891719745223, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI25145635, Length=313, Percent_Identity=47.2843450479233, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI32565903, Length=300, Percent_Identity=47.6666666666667, Blast_Score=250, Evalue=7e-67, Organism=Caenorhabditis elegans, GI32565909, Length=88, Percent_Identity=50, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32565907, Length=44, Percent_Identity=68.1818181818182, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=386, Percent_Identity=47.1502590673575, Blast_Score=318, Evalue=1e-87, Organism=Saccharomyces cerevisiae, GI6320710, Length=386, Percent_Identity=45.5958549222798, Blast_Score=313, Evalue=2e-86, Organism=Drosophila melanogaster, GI24580527, Length=385, Percent_Identity=48.0519480519481, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI24580525, Length=385, Percent_Identity=48.0519480519481, Blast_Score=311, Evalue=3e-85, Organism=Drosophila melanogaster, GI45552159, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580529, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580537, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580533, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580535, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580531, Length=385, Percent_Identity=48.0519480519481, Blast_Score=310, Evalue=9e-85, Organism=Drosophila melanogaster, GI24580541, Length=386, Percent_Identity=45.8549222797927, Blast_Score=288, Evalue=3e-78, Organism=Drosophila melanogaster, GI24580539, Length=125, Percent_Identity=45.6, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_JANSC (Q28UI9)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508648.1 - ProteinModelPortal: Q28UI9 - SMR: Q28UI9 - STRING: Q28UI9 - GeneID: 3933149 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_0706 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: QDGFHWK - ProtClustDB: PRK05250 - BioCyc: JSP290400:JANN_0706-MONOMER - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 42241; Mature: 42109
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNNYLFTSESVSEGHPDKVCDRISDAILDAFLSEEPEARVACETFATTNRVVIGGEVG CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHCCCCEEEEECCCC LSDQDKLAEYMGQVDPIVRACVKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVDAAENK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DEGAGDQGIMFGFAVAETPELMPAPIHYAHAILKKLAEVRKSGEQAVLGPDAKSQLSVRY CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEE EDGTPVGVSSIVLSTQHLDESLTSDDVRAIVEPYIRGELPDGWISAETEWHVNPTGKFVI CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEE GGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYASRYLAKNVVAAGLAH ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RCTIQLSYAIGVAKPLSIYCDTHQTGQVHEAEIERALGQVMDLTPRGIRTHLGMNRPIYE EEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHH RTAAYGHFGRAAEADGGFSWEKTDLADAIKAAL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure ARNNYLFTSESVSEGHPDKVCDRISDAILDAFLSEEPEARVACETFATTNRVVIGGEVG CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHCCCCEEEEECCCC LSDQDKLAEYMGQVDPIVRACVKDIGYEQDKFHHETVEITNLLHEQSAHIAQGVDAAENK CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DEGAGDQGIMFGFAVAETPELMPAPIHYAHAILKKLAEVRKSGEQAVLGPDAKSQLSVRY CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEE EDGTPVGVSSIVLSTQHLDESLTSDDVRAIVEPYIRGELPDGWISAETEWHVNPTGKFVI CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEE GGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYASRYLAKNVVAAGLAH ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RCTIQLSYAIGVAKPLSIYCDTHQTGQVHEAEIERALGQVMDLTPRGIRTHLGMNRPIYE EEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHH RTAAYGHFGRAAEADGGFSWEKTDLADAIKAAL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA