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The map label for this gene is ydgD [C]

Identifier: 89053185

GI number: 89053185

Start: 667320

End: 668174

Strand: Direct

Name: ydgD [C]

Synonym: Jann_0694

Alternate gene names: 89053185

Gene position: 667320-668174 (Clockwise)

Preceding gene: 89053184

Following gene: 89053186

Centisome position: 15.45

GC content: 67.13

Gene sequence:

>855_bases
ATGAAGCGTGGGTTTGTTTGGGGCGTTGTCTGTGCCCTGTCTGTTGTGTTCGGGGTCAATGGGGCGCAGGCCCAGGGGCT
GCCGCAGGTCCAGATGACGGAGGGGCATGGCGCTTTGCGGGCCGTCAATGGCGGGACCGAGGCGCAGCTTTGGCGCGCCG
TCGGGCGGCTTGATACCGGCGCGTCCTTTTGCTCGGCCACCCTGATTCGCGATGATCTGGTGCTGACGGCGGCCCATTGT
GTGTTCCATCCCGAGACATCCCGCCCCTTTGAGGCCTCGGATCTGACGTTTCTGGCGGGTCTGCGCAACGGCCATGCCGA
GGCGATCCGGGCCGTGCGGCGGATCATGGTTCTGCCAGAGTACCGCCCCGAATCCGGGCCGGATTTCGATATGATCGGGC
GCGATATTGCGCTGTTGCAGCTGGCGCTGCCGATCTCCATGACATCTATCGTGCCGATTTCGGTGGCACGCACGCCGTGG
CGCGAGGGCCGGGTGACAGTCGTGTCCTACGGGCGCGAGCGGGAGGAATTCGCCTCGATCGAAGAGGGGTGCGAGATTCT
GGATCGTCAGGGCACCGTCCGATCGCTGAGTTGCGAGGTCGTGTCCGGGGCGTCGGGCTCGCCGGTGCTGCGGGTCAATC
AGGGCCGCGCCGAGGTCGTCGCCGTGATGTCCGCCAGCGCGGAGATGCGCACCGGAGGGGATATCTCGCTGGCCGTGACG
CTGGACCGGCATCTGACCACGCTCATGGCCCAGGCCCAGGGGGCCGCGACGGGCAATCTGGGGGGCGTGCGCTCGTTCAT
CACGCCGGGCGAAGGCGCGCGTGACGATATCGGCGCGCGGTTTATCCGGCCCTGA

Upstream 100 bases:

>100_bases
GCTCCGTTAGGCGAACCGCGCACCAATCACACCGCCCCGCGCGTCACATTCTTGCCCCGCTTCCCCGCTACCACGGCCCA
AACGGGACGAGAGGTTTACC

Downstream 100 bases:

>100_bases
AACGGCTGCGAAACGGCCCAAAAACGGCGGGGTCTTGAAACCCCGTTTTGCCTTCCCACATCTGTCTGGTCGGTGCCGCC
TCGCGGGCTGACGCAATAGC

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: Trypsin Domain Protein; Trypsin Domain-Containing Protein; Trypsin; Protease YdgD; S1/S6 Family Peptidase; Protease

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKRGFVWGVVCALSVVFGVNGAQAQGLPQVQMTEGHGALRAVNGGTEAQLWRAVGRLDTGASFCSATLIRDDLVLTAAHC
VFHPETSRPFEASDLTFLAGLRNGHAEAIRAVRRIMVLPEYRPESGPDFDMIGRDIALLQLALPISMTSIVPISVARTPW
REGRVTVVSYGREREEFASIEEGCEILDRQGTVRSLSCEVVSGASGSPVLRVNQGRAEVVAVMSASAEMRTGGDISLAVT
LDRHLTTLMAQAQGAATGNLGGVRSFITPGEGARDDIGARFIRP

Sequences:

>Translated_284_residues
MKRGFVWGVVCALSVVFGVNGAQAQGLPQVQMTEGHGALRAVNGGTEAQLWRAVGRLDTGASFCSATLIRDDLVLTAAHC
VFHPETSRPFEASDLTFLAGLRNGHAEAIRAVRRIMVLPEYRPESGPDFDMIGRDIALLQLALPISMTSIVPISVARTPW
REGRVTVVSYGREREEFASIEEGCEILDRQGTVRSLSCEVVSGASGSPVLRVNQGRAEVVAVMSASAEMRTGGDISLAVT
LDRHLTTLMAQAQGAATGNLGGVRSFITPGEGARDDIGARFIRP
>Mature_284_residues
MKRGFVWGVVCALSVVFGVNGAQAQGLPQVQMTEGHGALRAVNGGTEAQLWRAVGRLDTGASFCSATLIRDDLVLTAAHC
VFHPETSRPFEASDLTFLAGLRNGHAEAIRAVRRIMVLPEYRPESGPDFDMIGRDIALLQLALPISMTSIVPISVARTPW
REGRVTVVSYGREREEFASIEEGCEILDRQGTVRSLSCEVVSGASGSPVLRVNQGRAEVVAVMSASAEMRTGGDISLAVT
LDRHLTTLMAQAQGAATGNLGGVRSFITPGEGARDDIGARFIRP

Specific function: Unknown

COG id: COG3591

COG function: function code E; V8-like Glu-specific endopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 30273; Mature: 30273

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGFVWGVVCALSVVFGVNGAQAQGLPQVQMTEGHGALRAVNGGTEAQLWRAVGRLDTG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHCCCCC
ASFCSATLIRDDLVLTAAHCVFHPETSRPFEASDLTFLAGLRNGHAEAIRAVRRIMVLPE
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
YRPESGPDFDMIGRDIALLQLALPISMTSIVPISVARTPWREGRVTVVSYGREREEFASI
CCCCCCCCHHHHCCHHHHHHHHHCCCHHHEEEEEEECCCCCCCCEEEEECCCCHHHHHHH
EEGCEILDRQGTVRSLSCEVVSGASGSPVLRVNQGRAEVVAVMSASAEMRTGGDISLAVT
HHHHHHHCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEE
LDRHLTTLMAQAQGAATGNLGGVRSFITPGEGARDDIGARFIRP
EHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRGFVWGVVCALSVVFGVNGAQAQGLPQVQMTEGHGALRAVNGGTEAQLWRAVGRLDTG
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHCCCCC
ASFCSATLIRDDLVLTAAHCVFHPETSRPFEASDLTFLAGLRNGHAEAIRAVRRIMVLPE
HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
YRPESGPDFDMIGRDIALLQLALPISMTSIVPISVARTPWREGRVTVVSYGREREEFASI
CCCCCCCCHHHHCCHHHHHHHHHCCCHHHEEEEEEECCCCCCCCEEEEECCCCHHHHHHH
EEGCEILDRQGTVRSLSCEVVSGASGSPVLRVNQGRAEVVAVMSASAEMRTGGDISLAVT
HHHHHHHCCCCCEEEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEE
LDRHLTTLMAQAQGAATGNLGGVRSFITPGEGARDDIGARFIRP
EHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA