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The map label for this gene is glcF [H]

Identifier: 89053184

GI number: 89053184

Start: 665889

End: 667229

Strand: Direct

Name: glcF [H]

Synonym: Jann_0693

Alternate gene names: 89053184

Gene position: 665889-667229 (Clockwise)

Preceding gene: 89053183

Following gene: 89053185

Centisome position: 15.42

GC content: 63.76

Gene sequence:

>1341_bases
ATGCAGACCACCTTCACGCCCGAACAGTTGAAAGATCCCGCCACCGCGCGCTCCAACGAGATCCTGCGCACCTGTGTCCA
TTGCGGATTCTGTACCGCGACCTGCCCGACCTATCAGGTGCTTGGCGATGAGCTGGACAGCCCACGGGGGCGGATCTACT
TGATCAAGGACATGATGGAAAATGACCGCCCGGCGGATGAGAAAACCGTCAAGCATATCGACCGCTGCCTGTCGTGTCTG
GCCTGCATGACGACCTGTCCCTCGGGCGTGCATTACATGCATCTGGTTGATCACGCTCGGGAATATATTGAACAGACCTA
CAAACGCCCCTGGTTTGAGCGGGTCCTGCGCTGGACGCTGGCGCGGATCCTGCCCTATCCCACGCGCTTCCGGCTGGCGT
TGCTTGGCGCGAAAATCGGACGTCCCTTTGCCCGCCTGATGCCCGACGCCCGTCTGCGCGCGATGCTGGACATGGCGCCC
GATTACATCCCCCCCGTCAGCCGCAATGATGATCCGCAGACGTTTCCGGTGTCTGGCCCGGCGGCGCAAAAGAAGATGCG
TGTCGCGCTGATGACGGGCTGTGCCCAAAAAGCGCTCAACACCGATATCAATGACGCCACGATCCGCATCCTGACGCGTC
TGGGCGCGGAGGTTGTGGTGGCCGAGGGCGCGGGGTGTTGCGGCGCGCTGACCCATCACATGGGCAAGACCTCCGAAAGC
CACGGCACGGCGGCCAAGAACATCCGCGCCTGGGCCAATGAAATGCGCGGTGAGGGTCTGGACGCGATCGTGATCAACAC
CTCCGGCTGCGGCACGACCGTTAAGGACTACGGGCACATGTTCCGCGAAGACGCGAAGCTGGCGGAGGACGCGAAGGCCG
TGGCGGGGCTGGCCAAGGACATCAGCGAGGTGCTGATCGACCTGATGCCCGAGGATGCGGTGCAGAAAAACGGCGACGGG
CTGCGCGTGGCCTATCACGCGGCCTGCTCCCTGCAACACGGCCAGCAGATCAAAACCTACCCCAAGGATCTGCTGAAGCG
CGCCGGGTTCAAGGTGTTGGAGCCTGCCGACAGTCACCTCTGCTGCGGCTCTGCGGGCACCTACAACCTGATGCAGCCCG
AGATTTCGGGGCAGTTGAAAGAGCGGAAGGTTCAGACGCTGGAGGCCACGCGGCCCGACATCATCTCTGCCGGGAATATC
GGGTGCATGATGCAGATCGGCGGTGGCACGGACGTGCCGATCGTCCACACGGTGGAGCTTTTGGACTGGGCCACGGGCGG
CCCGCGTCCGCCCGCGCTGGACCGCCACCGGGATGCGCCCGCGGTGCCAATGCTCCGTTAG

Upstream 100 bases:

>100_bases
CGGCCTTGCCGCCTATCTGGCCATCCCGCGATGACACGCAGTTTCACACGTCGCCCGCGCCCCGTCGGGGCCGCCGCGCG
CACGATCTGAGGACACGGAC

Downstream 100 bases:

>100_bases
GCGAACCGCGCACCAATCACACCGCCCCGCGCGTCACATTCTTGCCCCGCTTCCCCGCTACCACGGCCCAAACGGGACGA
GAGGTTTACCATGAAGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MQTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMMENDRPADEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHAREYIEQTYKRPWFERVLRWTLARILPYPTRFRLALLGAKIGRPFARLMPDARLRAMLDMAP
DYIPPVSRNDDPQTFPVSGPAAQKKMRVALMTGCAQKALNTDINDATIRILTRLGAEVVVAEGAGCCGALTHHMGKTSES
HGTAAKNIRAWANEMRGEGLDAIVINTSGCGTTVKDYGHMFREDAKLAEDAKAVAGLAKDISEVLIDLMPEDAVQKNGDG
LRVAYHAACSLQHGQQIKTYPKDLLKRAGFKVLEPADSHLCCGSAGTYNLMQPEISGQLKERKVQTLEATRPDIISAGNI
GCMMQIGGGTDVPIVHTVELLDWATGGPRPPALDRHRDAPAVPMLR

Sequences:

>Translated_446_residues
MQTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMMENDRPADEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHAREYIEQTYKRPWFERVLRWTLARILPYPTRFRLALLGAKIGRPFARLMPDARLRAMLDMAP
DYIPPVSRNDDPQTFPVSGPAAQKKMRVALMTGCAQKALNTDINDATIRILTRLGAEVVVAEGAGCCGALTHHMGKTSES
HGTAAKNIRAWANEMRGEGLDAIVINTSGCGTTVKDYGHMFREDAKLAEDAKAVAGLAKDISEVLIDLMPEDAVQKNGDG
LRVAYHAACSLQHGQQIKTYPKDLLKRAGFKVLEPADSHLCCGSAGTYNLMQPEISGQLKERKVQTLEATRPDIISAGNI
GCMMQIGGGTDVPIVHTVELLDWATGGPRPPALDRHRDAPAVPMLR
>Mature_446_residues
MQTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMMENDRPADEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHAREYIEQTYKRPWFERVLRWTLARILPYPTRFRLALLGAKIGRPFARLMPDARLRAMLDMAP
DYIPPVSRNDDPQTFPVSGPAAQKKMRVALMTGCAQKALNTDINDATIRILTRLGAEVVVAEGAGCCGALTHHMGKTSES
HGTAAKNIRAWANEMRGEGLDAIVINTSGCGTTVKDYGHMFREDAKLAEDAKAVAGLAKDISEVLIDLMPEDAVQKNGDG
LRVAYHAACSLQHGQQIKTYPKDLLKRAGFKVLEPADSHLCCGSAGTYNLMQPEISGQLKERKVQTLEATRPDIISAGNI
GCMMQIGGGTDVPIVHTVELLDWATGGPRPPALDRHRDAPAVPMLR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=424, Percent_Identity=41.7452830188679, Blast_Score=328, Evalue=5e-91,
Organism=Escherichia coli, GI1786497, Length=242, Percent_Identity=28.099173553719, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 49005; Mature: 49005

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMME
CCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEEEHHHHC
NDRPADEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYIEQTYKRPWFERVLRWTL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ARILPYPTRFRLALLGAKIGRPFARLMPDARLRAMLDMAPDYIPPVSRNDDPQTFPVSGP
HHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AAQKKMRVALMTGCAQKALNTDINDATIRILTRLGAEVVVAEGAGCCGALTHHMGKTSES
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCC
HGTAAKNIRAWANEMRGEGLDAIVINTSGCGTTVKDYGHMFREDAKLAEDAKAVAGLAKD
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISEVLIDLMPEDAVQKNGDGLRVAYHAACSLQHGQQIKTYPKDLLKRAGFKVLEPADSHL
HHHHHHHHCCHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCE
CCGSAGTYNLMQPEISGQLKERKVQTLEATRPDIISAGNIGCMMQIGGGTDVPIVHTVEL
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCHHHHHHH
LDWATGGPRPPALDRHRDAPAVPMLR
HHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTTFTPEQLKDPATARSNEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMME
CCCCCCHHHHCCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHCCCCCCEEEEEHHHHC
NDRPADEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHAREYIEQTYKRPWFERVLRWTL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ARILPYPTRFRLALLGAKIGRPFARLMPDARLRAMLDMAPDYIPPVSRNDDPQTFPVSGP
HHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AAQKKMRVALMTGCAQKALNTDINDATIRILTRLGAEVVVAEGAGCCGALTHHMGKTSES
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCC
HGTAAKNIRAWANEMRGEGLDAIVINTSGCGTTVKDYGHMFREDAKLAEDAKAVAGLAKD
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISEVLIDLMPEDAVQKNGDGLRVAYHAACSLQHGQQIKTYPKDLLKRAGFKVLEPADSHL
HHHHHHHHCCHHHHHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCE
CCGSAGTYNLMQPEISGQLKERKVQTLEATRPDIISAGNIGCMMQIGGGTDVPIVHTVEL
ECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCHHHHHHH
LDWATGGPRPPALDRHRDAPAVPMLR
HHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]