| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is pssA [H]
Identifier: 88658585
GI number: 88658585
Start: 794007
End: 794783
Strand: Direct
Name: pssA [H]
Synonym: ECH_0780
Alternate gene names: 88658585
Gene position: 794007-794783 (Clockwise)
Preceding gene: 88657717
Following gene: 88658607
Centisome position: 67.5
GC content: 31.15
Gene sequence:
>777_bases ATGAAAGAGGAGCAGAGTAGCAAATTTTTTCCTATTACTAGGTTATTTCCTAATATAGTAACCCTATTAGGTTTATGTGC TGGCCTGACTTCTATAAAATTTACTTTTATTGGTAAATGGGAATCTGCTGTAATGTTCATCATTATAGCAGCACTCATAG ATGGAATGGATGGTAGAATTGCTAGATTTCTCAATTCTACAAGCGGCTTCGGTGCTCAGCTTGATTCTTTTGCAGATTTT TTAAATTTTGGAGTTGCTCCAGCATTTTTATTGTATTTTTGGTCTCTTAAGCAAATAAAAGTCATAGGATGGATGCTAGT AATGATGTTCGTCATTTGCATGTCAATCAGACTTGCAAGATTCAATGTGTCCTTATATGAAGAAAAAAAATTAGATTGGC ACAAATTTTTCTTCGTAGGAGTACCTGCTCCATTAGGAGCAGTACTGTCATTAATTCCAATAATGTTGACCTTTTACTAC CATGATAATCATTGGTTAGTTACAAATTTATCTGATCAAAATAATGTAGCAATATACTTTGCCGTTATTGCATTTTTATT AGTTAGCAACATTCCTACATTTTCTGCAAAACATATTTATATACCAAAAAATCTATCTTATATATTTATTCTACTGTTTG GCATATTCATTGTATTTGCAATAACAAAACCATGGATTACATTTCCAGTTGTTGGAATGATGTATATATTATCAATTCCT ATAAGTAGCATGGTATACATATACATTATGTGCAAAACTAAAGGTAAAATAATCTAG
Upstream 100 bases:
>100_bases ATATCAGTGTTTAAGGGACAAACAGTAATAGGTGGAGAAACTATTTTAGCATATTTACAAGACGCTCCTAAACAATTAAC AGTTAAGTCTATATAATAAT
Downstream 100 bases:
>100_bases TACACAATTAACAATGACAATCCTTGAATTTGCAGATTTTTTTCCACACATTTCTGGAGTATTAGAGTCTATTTTTTCTC TCACAATATTCAGAATTCCA
Product: putative CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKEEQSSKFFPITRLFPNIVTLLGLCAGLTSIKFTFIGKWESAVMFIIIAALIDGMDGRIARFLNSTSGFGAQLDSFADF LNFGVAPAFLLYFWSLKQIKVIGWMLVMMFVICMSIRLARFNVSLYEEKKLDWHKFFFVGVPAPLGAVLSLIPIMLTFYY HDNHWLVTNLSDQNNVAIYFAVIAFLLVSNIPTFSAKHIYIPKNLSYIFILLFGIFIVFAITKPWITFPVVGMMYILSIP ISSMVYIYIMCKTKGKII
Sequences:
>Translated_258_residues MKEEQSSKFFPITRLFPNIVTLLGLCAGLTSIKFTFIGKWESAVMFIIIAALIDGMDGRIARFLNSTSGFGAQLDSFADF LNFGVAPAFLLYFWSLKQIKVIGWMLVMMFVICMSIRLARFNVSLYEEKKLDWHKFFFVGVPAPLGAVLSLIPIMLTFYY HDNHWLVTNLSDQNNVAIYFAVIAFLLVSNIPTFSAKHIYIPKNLSYIFILLFGIFIVFAITKPWITFPVVGMMYILSIP ISSMVYIYIMCKTKGKII >Mature_258_residues MKEEQSSKFFPITRLFPNIVTLLGLCAGLTSIKFTFIGKWESAVMFIIIAALIDGMDGRIARFLNSTSGFGAQLDSFADF LNFGVAPAFLLYFWSLKQIKVIGWMLVMMFVICMSIRLARFNVSLYEEKKLDWHKFFFVGVPAPLGAVLSLIPIMLTFYY HDNHWLVTNLSDQNNVAIYFAVIAFLLVSNIPTFSAKHIYIPKNLSYIFILLFGIFIVFAITKPWITFPVVGMMYILSIP ISSMVYIYIMCKTKGKII
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=136, Percent_Identity=34.5588235294118, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29424; Mature: 29424
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEEQSSKFFPITRLFPNIVTLLGLCAGLTSIKFTFIGKWESAVMFIIIAALIDGMDGRI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHCCCCHHH ARFLNSTSGFGAQLDSFADFLNFGVAPAFLLYFWSLKQIKVIGWMLVMMFVICMSIRLAR HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNVSLYEEKKLDWHKFFFVGVPAPLGAVLSLIPIMLTFYYHDNHWLVTNLSDQNNVAIYF HCEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCEEHHH AVIAFLLVSNIPTFSAKHIYIPKNLSYIFILLFGIFIVFAITKPWITFPVVGMMYILSIP HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ISSMVYIYIMCKTKGKII HHHEEEEEEEEECCCCCC >Mature Secondary Structure MKEEQSSKFFPITRLFPNIVTLLGLCAGLTSIKFTFIGKWESAVMFIIIAALIDGMDGRI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHCCCCHHH ARFLNSTSGFGAQLDSFADFLNFGVAPAFLLYFWSLKQIKVIGWMLVMMFVICMSIRLAR HHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNVSLYEEKKLDWHKFFFVGVPAPLGAVLSLIPIMLTFYYHDNHWLVTNLSDQNNVAIYF HCEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCEEHHH AVIAFLLVSNIPTFSAKHIYIPKNLSYIFILLFGIFIVFAITKPWITFPVVGMMYILSIP HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ISSMVYIYIMCKTKGKII HHHEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]