| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658559
Identifier: 88658559
GI number: 88658559
Start: 886904
End: 887812
Strand: Direct
Name: 88658559
Synonym: ECH_0865
Alternate gene names: NA
Gene position: 886904-887812 (Clockwise)
Preceding gene: 88657669
Following gene: 88658304
Centisome position: 75.4
GC content: 31.24
Gene sequence:
>909_bases ATGAAGCAATCAATTTTTGCACTTCCTATTCAAAACCGACCAAATAGTGCCGCTACACAGGGTAAAACATCACACCTAGA TTTCCATCGTATTCAGTATACTATCAATGGTATGAAAGTCCATGCTGCAACATTTTTTACCCAATATAATACATTAGAAT CAACCATAAAGTCCGGAAATATGACATCTGACTGTAATGTTATTAGGCTAGCAAACAAACATAAAGAAGCCATAAAACAA GCATTAGATATAGATGATAAAACATGTCGCGACATGTTTTACCACAGGATAGCAATGGCCACAATTTTTGAATTAATTTT CGACACAAACACTGGAGTGGTTCCCAACATAAATATAACACATGAAATAGTAAGCCATTGTAATCAAGCAGGAAATTTCG CTATGCCAGCAATGTTCTTTGAAAAAATTTTAAAAACATGTAAAGAATTTAATATTACTAAAACAAAGATTAAAGATCTA AAGGCATCACTTACAATAGAAAACAGTAATGAAATAACATGTACTATTAGCACACACACTAAAATATACAAGCATAACCA AACTCAGGGATACGTTTTACCATTCAAATTAACATTTACGATGATGCCAGAAAATAGTCACAGCTTTTCAGATATGTTAT ACAAAAACATTACTTTAGAAGTAACAGTACCTGACACAATACAAAAGTATATTACAAACAACACTACTAGTAGTAAAATT GAGAGTAACAGAATCACATTAACTAATATGTGCAGAAATTCAGAAGGTAATACACACCTTACATATTCTTTACCAAATTT AAAAATTCCTTCATTAATTAATAAATCAAGTTTCGGTGCTATAGTAAAGCATAACTATGAATCTGTTGAAAGTTGCTCAC CAGTAGTACAGCATCAAACACATCATTAA
Upstream 100 bases:
>100_bases TGTAATGTTAATCATATTTCTAGCAGTTGCTACGTTTTACTACCTACGCAACAAGCAATCAACATTGTTCAAAAAATATA TACCCATGTCAGAAGAAACA
Downstream 100 bases:
>100_bases ACACTTGTATTCAAATTTCCAAAGTAGCCTGTACTTTTTTACACAATACAAGTTTTCTACTACATAATTATAATTGAATT TACATTTGCTATATTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKQSIFALPIQNRPNSAATQGKTSHLDFHRIQYTINGMKVHAATFFTQYNTLESTIKSGNMTSDCNVIRLANKHKEAIKQ ALDIDDKTCRDMFYHRIAMATIFELIFDTNTGVVPNINITHEIVSHCNQAGNFAMPAMFFEKILKTCKEFNITKTKIKDL KASLTIENSNEITCTISTHTKIYKHNQTQGYVLPFKLTFTMMPENSHSFSDMLYKNITLEVTVPDTIQKYITNNTTSSKI ESNRITLTNMCRNSEGNTHLTYSLPNLKIPSLINKSSFGAIVKHNYESVESCSPVVQHQTHH
Sequences:
>Translated_302_residues MKQSIFALPIQNRPNSAATQGKTSHLDFHRIQYTINGMKVHAATFFTQYNTLESTIKSGNMTSDCNVIRLANKHKEAIKQ ALDIDDKTCRDMFYHRIAMATIFELIFDTNTGVVPNINITHEIVSHCNQAGNFAMPAMFFEKILKTCKEFNITKTKIKDL KASLTIENSNEITCTISTHTKIYKHNQTQGYVLPFKLTFTMMPENSHSFSDMLYKNITLEVTVPDTIQKYITNNTTSSKI ESNRITLTNMCRNSEGNTHLTYSLPNLKIPSLINKSSFGAIVKHNYESVESCSPVVQHQTHH >Mature_302_residues MKQSIFALPIQNRPNSAATQGKTSHLDFHRIQYTINGMKVHAATFFTQYNTLESTIKSGNMTSDCNVIRLANKHKEAIKQ ALDIDDKTCRDMFYHRIAMATIFELIFDTNTGVVPNINITHEIVSHCNQAGNFAMPAMFFEKILKTCKEFNITKTKIKDL KASLTIENSNEITCTISTHTKIYKHNQTQGYVLPFKLTFTMMPENSHSFSDMLYKNITLEVTVPDTIQKYITNNTTSSKI ESNRITLTNMCRNSEGNTHLTYSLPNLKIPSLINKSSFGAIVKHNYESVESCSPVVQHQTHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34294; Mature: 34294
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSIFALPIQNRPNSAATQGKTSHLDFHRIQYTINGMKVHAATFFTQYNTLESTIKSGN CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEHHHHHHHHHHHHCCC MTSDCNVIRLANKHKEAIKQALDIDDKTCRDMFYHRIAMATIFELIFDTNTGVVPNINIT CCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH HEIVSHCNQAGNFAMPAMFFEKILKTCKEFNITKTKIKDLKASLTIENSNEITCTISTHT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEECCCEEEEEEECCE KIYKHNQTQGYVLPFKLTFTMMPENSHSFSDMLYKNITLEVTVPDTIQKYITNNTTSSKI EEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCEEEEEECCHHHHHHHCCCCCCCCC ESNRITLTNMCRNSEGNTHLTYSLPNLKIPSLINKSSFGAIVKHNYESVESCSPVVQHQT CCCCEEEEEHHCCCCCCEEEEEECCCCCCCHHHCCCCCCHHEECCCHHHHHHCHHHHCCC HH CC >Mature Secondary Structure MKQSIFALPIQNRPNSAATQGKTSHLDFHRIQYTINGMKVHAATFFTQYNTLESTIKSGN CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEHHHHHHHHHHHHCCC MTSDCNVIRLANKHKEAIKQALDIDDKTCRDMFYHRIAMATIFELIFDTNTGVVPNINIT CCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH HEIVSHCNQAGNFAMPAMFFEKILKTCKEFNITKTKIKDLKASLTIENSNEITCTISTHT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEECCCEEEEEEECCE KIYKHNQTQGYVLPFKLTFTMMPENSHSFSDMLYKNITLEVTVPDTIQKYITNNTTSSKI EEEECCCCCCEEEEEEEEEEECCCCCCHHHHHHHHCEEEEEECCHHHHHHHCCCCCCCCC ESNRITLTNMCRNSEGNTHLTYSLPNLKIPSLINKSSFGAIVKHNYESVESCSPVVQHQT CCCCEEEEEHHCCCCCCEEEEEECCCCCCCHHHCCCCCCHHEECCCHHHHHHCHHHHCCC HH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA