| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657669
Identifier: 88657669
GI number: 88657669
Start: 885280
End: 886272
Strand: Direct
Name: 88657669
Synonym: ECH_0864
Alternate gene names: NA
Gene position: 885280-886272 (Clockwise)
Preceding gene: 88658334
Following gene: 88658559
Centisome position: 75.26
GC content: 27.69
Gene sequence:
>993_bases ATGAACAATACCATTTTAACAATCATAATCATCATAGCATTAATAATACTGATGATTGTTCTTCTATCATTTATCTTTTG CGCTATTAATAACAGATCTCACAAGGTATTCTTTGATAAACAATTACCCAACATATCTAGAGATTTTATACAAACAATAT TTTACCCAGAAAATAACAACCAACTAAACATAACAAATCTATCGCACAAAATTCTTAGCAACCAATTAGCGGTTAGTATG CCTAATCTTGACGAAAATTTATTTAAACAGTTACCTAGAATATTAAAATTTTACCAATCACAAGATACATCCAATACATA CATTAACCAACATTTTCAATATATAGTACAATCGTTAGGTATAAAAACGAACTATAACAACCTTAAAACATATCATCCTA AAATTGCTTTAGCTGCAACCTTAGATAATATGTTTACAGTCCTAAATAACTCAGAAATTAGCCCAGATATAATACATGAA ATTGTCAATCATTTCCATCAAGAGGTATATGAACAAGCAGGAATTAAAATATTAAATAACATTTTTAATACAGATAAAAA CCCTACTAATATTATTAAACCTGTAAACCATATTATACAATTTGCAGTATATAACTATAATCTAATAACTATAAGCATAA TTAGCAATATGTCATTATTCGACACTGCAAAGCCTAATAAGGTACATTCTTTTAGTAGCGTTTTCCATTTCAATATGTTA TTAAGAAAAAACCCACGAACAAACAGAAGCTCTATATCATATAATCAAACAACCTTTACTTTATTCATTCCTAATAGTAT TAAACATTACATTACAAAAGAAAAGTGTAACACACAATGTATGCAACCTTCTTCTATAACACAAGATCCTGATTGTGCCA CATTACATTATTACAACACAAGTAATTCTCATACTTCTACCTTAGAATATCGCTTACCAAACCCAAAAGCCAAACCATTA TTTCAAAACAGAAGAGATAATATACAGATCTAA
Upstream 100 bases:
>100_bases TTACCACTTACATTATATAAAATATATAAAATTTAAATAAAAAGATTAATTTATTATAAATAATATGCTAAAGTAAACGT AAATATACATAGTGTGGCAT
Downstream 100 bases:
>100_bases TAGATATTACTACAAATTAAACATTCTAATAAAAAAGGAACCAATAAAAAGTGCTATAAAACACATATGTATACTTATAC ACCAATATTAAAATTAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNNTILTIIIIIALIILMIVLLSFIFCAINNRSHKVFFDKQLPNISRDFIQTIFYPENNNQLNITNLSHKILSNQLAVSM PNLDENLFKQLPRILKFYQSQDTSNTYINQHFQYIVQSLGIKTNYNNLKTYHPKIALAATLDNMFTVLNNSEISPDIIHE IVNHFHQEVYEQAGIKILNNIFNTDKNPTNIIKPVNHIIQFAVYNYNLITISIISNMSLFDTAKPNKVHSFSSVFHFNML LRKNPRTNRSSISYNQTTFTLFIPNSIKHYITKEKCNTQCMQPSSITQDPDCATLHYYNTSNSHTSTLEYRLPNPKAKPL FQNRRDNIQI
Sequences:
>Translated_330_residues MNNTILTIIIIIALIILMIVLLSFIFCAINNRSHKVFFDKQLPNISRDFIQTIFYPENNNQLNITNLSHKILSNQLAVSM PNLDENLFKQLPRILKFYQSQDTSNTYINQHFQYIVQSLGIKTNYNNLKTYHPKIALAATLDNMFTVLNNSEISPDIIHE IVNHFHQEVYEQAGIKILNNIFNTDKNPTNIIKPVNHIIQFAVYNYNLITISIISNMSLFDTAKPNKVHSFSSVFHFNML LRKNPRTNRSSISYNQTTFTLFIPNSIKHYITKEKCNTQCMQPSSITQDPDCATLHYYNTSNSHTSTLEYRLPNPKAKPL FQNRRDNIQI >Mature_330_residues MNNTILTIIIIIALIILMIVLLSFIFCAINNRSHKVFFDKQLPNISRDFIQTIFYPENNNQLNITNLSHKILSNQLAVSM PNLDENLFKQLPRILKFYQSQDTSNTYINQHFQYIVQSLGIKTNYNNLKTYHPKIALAATLDNMFTVLNNSEISPDIIHE IVNHFHQEVYEQAGIKILNNIFNTDKNPTNIIKPVNHIIQFAVYNYNLITISIISNMSLFDTAKPNKVHSFSSVFHFNML LRKNPRTNRSSISYNQTTFTLFIPNSIKHYITKEKCNTQCMQPSSITQDPDCATLHYYNTSNSHTSTLEYRLPNPKAKPL FQNRRDNIQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38321; Mature: 38321
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTILTIIIIIALIILMIVLLSFIFCAINNRSHKVFFDKQLPNISRDFIQTIFYPENNN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHEECCCCC QLNITNLSHKILSNQLAVSMPNLDENLFKQLPRILKFYQSQDTSNTYINQHFQYIVQSLG EEEEEHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC IKTNYNNLKTYHPKIALAATLDNMFTVLNNSEISPDIIHEIVNHFHQEVYEQAGIKILNN CCCCCCCCEEECCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFNTDKNPTNIIKPVNHIIQFAVYNYNLITISIISNMSLFDTAKPNKVHSFSSVFHFNML HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHH LRKNPRTNRSSISYNQTTFTLFIPNSIKHYITKEKCNTQCMQPSSITQDPDCATLHYYNT HHCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEC SNSHTSTLEYRLPNPKAKPLFQNRRDNIQI CCCCCEEEEEECCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MNNTILTIIIIIALIILMIVLLSFIFCAINNRSHKVFFDKQLPNISRDFIQTIFYPENNN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHEECCCCC QLNITNLSHKILSNQLAVSMPNLDENLFKQLPRILKFYQSQDTSNTYINQHFQYIVQSLG EEEEEHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC IKTNYNNLKTYHPKIALAATLDNMFTVLNNSEISPDIIHEIVNHFHQEVYEQAGIKILNN CCCCCCCCEEECCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFNTDKNPTNIIKPVNHIIQFAVYNYNLITISIISNMSLFDTAKPNKVHSFSSVFHFNML HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHH LRKNPRTNRSSISYNQTTFTLFIPNSIKHYITKEKCNTQCMQPSSITQDPDCATLHYYNT HHCCCCCCCCCEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEC SNSHTSTLEYRLPNPKAKPLFQNRRDNIQI CCCCCEEEEEECCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA