Click here to switch to the map view.

The map label for this gene is 88658233

Identifier: 88658233

GI number: 88658233

Start: 912875

End: 914020

Strand: Direct

Name: 88658233

Synonym: ECH_0888

Alternate gene names: NA

Gene position: 912875-914020 (Clockwise)

Preceding gene: 88657658

Following gene: 88658382

Centisome position: 77.61

GC content: 34.55

Gene sequence:

>1146_bases
ATGGTACTATTAAAGCACACTTTTGTGTTGTACACCACTCAGTGGCTATTTCATCTACTTTTTAAGTTAACATGGTACAG
GGCTATGATAGTAGGACAAAACAATCAAGGGGGTTCTTGCGCAGGATCAGATGAATATCAACCACTAAACACAGATCCAC
TTCCAAATGACGATACATCAACAGTAGAATATAATGAGTTTTCCCCTCTATTAAGGTCAGAAGAAGATGAAACACCAGAT
AAGGCAAATGATGAAATACTGAATAAGATAGATTTTGATAGATATTTTGTAATTTTTTCTTTCATTGGGTTATTAGCAGA
AGCAGCGTCTTCTATATTCAATTTAGTATCAACCCAAGTTTTTATTCCTACTAGCACTAAACATGCAGTAGCTACTGCTT
TTTATGCTCTCTGTATACTAATTGCAATTTCCATGATTGTAAGTTCAATACTTGCAATAAAGAAATCACTCAACCAAAAA
AAGCATCTTGACGATATGCCAACAGATGCATCAAATGAAGAATGTGTAGAAGAGAACGCCAAATATAAAAAATTAAAAAA
AATACAGGCTCATGCTCAAGTTTCTGAAAATGCTCTTACTATCATTTCACAGGTGATGTGGCTTATTGTTTATATTGCAT
CACTAGTAATGATATCTATGGGTGACAACCAAATACTTGAAAACATGAGCCTGTTTTTATCGATTACTGCATCTCTTTTA
GGTATTATATCTTGTGTTATAAGGTTAATAGATGCAAATATATCACGTAAGACATCTGGTTCTGAGGAAGAAAAAAAACA
ACACCTTAGTTTCACAATTTTTTGCGGTATCATCTTAGCTTTTGAGATAATTCATTGTGCATGCCATATATCAGAAGCAA
TATCTCTTGGTGGAAAAATGCACAATCTTTATGACTTTCAGAATATTCCTATACTCTGTTTCGAACTGATAACAGTAGCT
ATGTTTATTGCATCATTCTTCATAGAACAGTGCATTAAAAGTAAAGGAGGAAAGCACCAGACCAATGATGATGGTGTTGC
CGCTGCCGCTTGTTGCGGTGATAATCTCCATCCTAGTAGCTTATTAGCTGATGATAGTGGTGGTAATATTGCCAGACTTA
TAGTAGCACAAGAACTATCAGCTTAA

Upstream 100 bases:

>100_bases
TCATTTCACAAGAAATCAGTAAAGTGGATTACTGTTGTTAGAAAACCACTCAGAAAGAAAATACTGTTACTAAAAATCAA
CTTGATGTTTCATAATTTAT

Downstream 100 bases:

>100_bases
CGTTCATCTATAATATGTGGAACAATAACGCTAATTTCATAGCAGTATTAACATAGTATAGAAAATGTATAACCGTACAA
CCAACTTACAACTTTTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MVLLKHTFVLYTTQWLFHLLFKLTWYRAMIVGQNNQGGSCAGSDEYQPLNTDPLPNDDTSTVEYNEFSPLLRSEEDETPD
KANDEILNKIDFDRYFVIFSFIGLLAEAASSIFNLVSTQVFIPTSTKHAVATAFYALCILIAISMIVSSILAIKKSLNQK
KHLDDMPTDASNEECVEENAKYKKLKKIQAHAQVSENALTIISQVMWLIVYIASLVMISMGDNQILENMSLFLSITASLL
GIISCVIRLIDANISRKTSGSEEEKKQHLSFTIFCGIILAFEIIHCACHISEAISLGGKMHNLYDFQNIPILCFELITVA
MFIASFFIEQCIKSKGGKHQTNDDGVAAAACCGDNLHPSSLLADDSGGNIARLIVAQELSA

Sequences:

>Translated_381_residues
MVLLKHTFVLYTTQWLFHLLFKLTWYRAMIVGQNNQGGSCAGSDEYQPLNTDPLPNDDTSTVEYNEFSPLLRSEEDETPD
KANDEILNKIDFDRYFVIFSFIGLLAEAASSIFNLVSTQVFIPTSTKHAVATAFYALCILIAISMIVSSILAIKKSLNQK
KHLDDMPTDASNEECVEENAKYKKLKKIQAHAQVSENALTIISQVMWLIVYIASLVMISMGDNQILENMSLFLSITASLL
GIISCVIRLIDANISRKTSGSEEEKKQHLSFTIFCGIILAFEIIHCACHISEAISLGGKMHNLYDFQNIPILCFELITVA
MFIASFFIEQCIKSKGGKHQTNDDGVAAAACCGDNLHPSSLLADDSGGNIARLIVAQELSA
>Mature_381_residues
MVLLKHTFVLYTTQWLFHLLFKLTWYRAMIVGQNNQGGSCAGSDEYQPLNTDPLPNDDTSTVEYNEFSPLLRSEEDETPD
KANDEILNKIDFDRYFVIFSFIGLLAEAASSIFNLVSTQVFIPTSTKHAVATAFYALCILIAISMIVSSILAIKKSLNQK
KHLDDMPTDASNEECVEENAKYKKLKKIQAHAQVSENALTIISQVMWLIVYIASLVMISMGDNQILENMSLFLSITASLL
GIISCVIRLIDANISRKTSGSEEEKKQHLSFTIFCGIILAFEIIHCACHISEAISLGGKMHNLYDFQNIPILCFELITVA
MFIASFFIEQCIKSKGGKHQTNDDGVAAAACCGDNLHPSSLLADDSGGNIARLIVAQELSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42141; Mature: 42141

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLKHTFVLYTTQWLFHLLFKLTWYRAMIVGQNNQGGSCAGSDEYQPLNTDPLPNDDTS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVEYNEFSPLLRSEEDETPDKANDEILNKIDFDRYFVIFSFIGLLAEAASSIFNLVSTQV
CEECHHCCHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
FIPTSTKHAVATAFYALCILIAISMIVSSILAIKKSLNQKKHLDDMPTDASNEECVEENA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
KYKKLKKIQAHAQVSENALTIISQVMWLIVYIASLVMISMGDNQILENMSLFLSITASLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GIISCVIRLIDANISRKTSGSEEEKKQHLSFTIFCGIILAFEIIHCACHISEAISLGGKM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HNLYDFQNIPILCFELITVAMFIASFFIEQCIKSKGGKHQTNDDGVAAAACCGDNLHPSS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCCHH
LLADDSGGNIARLIVAQELSA
HCCCCCCCCEEHHHHHHHHCC
>Mature Secondary Structure
MVLLKHTFVLYTTQWLFHLLFKLTWYRAMIVGQNNQGGSCAGSDEYQPLNTDPLPNDDTS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVEYNEFSPLLRSEEDETPDKANDEILNKIDFDRYFVIFSFIGLLAEAASSIFNLVSTQV
CEECHHCCHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
FIPTSTKHAVATAFYALCILIAISMIVSSILAIKKSLNQKKHLDDMPTDASNEECVEENA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
KYKKLKKIQAHAQVSENALTIISQVMWLIVYIASLVMISMGDNQILENMSLFLSITASLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GIISCVIRLIDANISRKTSGSEEEKKQHLSFTIFCGIILAFEIIHCACHISEAISLGGKM
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
HNLYDFQNIPILCFELITVAMFIASFFIEQCIKSKGGKHQTNDDGVAAAACCGDNLHPSS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHCCCCCCCHH
LLADDSGGNIARLIVAQELSA
HCCCCCCCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA