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The map label for this gene is ctaG

Identifier: 88608456

GI number: 88608456

Start: 219190

End: 219735

Strand: Direct

Name: ctaG

Synonym: NSE_0258

Alternate gene names: 88608456

Gene position: 219190-219735 (Clockwise)

Preceding gene: 88608343

Following gene: 88608587

Centisome position: 25.52

GC content: 41.94

Gene sequence:

>546_bases
ATGTCCGGTGGAAAGAGACGAATCCTGCTGCTTGTCTTGCTGCCGGTTTTTATGCTGCTTCTTTCATTTGCTTCTGTTCC
GCTCTATAGCCTTTTCTGTAAAGCGACTGGCTATGCCGGCGCTGTTAAGAGGTCAAAGCGCAGCTTTGACTTACCAATTG
GTTCTCGTGATATAGTTGTGAGATTTAATGCAGATGTAACTAAGAATCTGCCGGTACGTTTTTCTGTCCAGGACTATCCA
GTAGTTGTTAAACCAGGTCAGAATGCACTTATATTCTATGCGGTCGAGAACACCACAGACGAGCCAATTGAGGCGATTGC
AGTTTATAATGTAACACCCTACAAGGCTGCAAAATATTTCAATAAAGTTGCGTGCTTTTGTTTTGAAAAGCAGATACTCC
CACCAAAGAAAAGGGTAGTAATGCCTGTATCATTTTTCATTGACCCGGAGATTGAAAAGGATCCCCAAATGGATGAGATA
AAGACATTTACCCTATCGTATACTTTTTTTAGATACGCCGAGTATAGCGGGGGATGGTTAAAATAA

Upstream 100 bases:

>100_bases
TAAGCAGGAGAAGTACTCGTTTAGAAAGTATGATCCTGTTGTCCGCAAACACGTGCTTTTTAAGGAAGCTAAGCTGAATA
AGTAATCTTCTTAGTTATAC

Downstream 100 bases:

>100_bases
ATTTTATATCACCTAACGTATTTTAAGTAAAAATGTTTTCGACTTTTCCAGCAGCGGACACAATATATTGAACTGTGGTG
AAAAAAAAACTACATATCGG

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSGGKRRILLLVLLPVFMLLLSFASVPLYSLFCKATGYAGAVKRSKRSFDLPIGSRDIVVRFNADVTKNLPVRFSVQDYP
VVVKPGQNALIFYAVENTTDEPIEAIAVYNVTPYKAAKYFNKVACFCFEKQILPPKKRVVMPVSFFIDPEIEKDPQMDEI
KTFTLSYTFFRYAEYSGGWLK

Sequences:

>Translated_181_residues
MSGGKRRILLLVLLPVFMLLLSFASVPLYSLFCKATGYAGAVKRSKRSFDLPIGSRDIVVRFNADVTKNLPVRFSVQDYP
VVVKPGQNALIFYAVENTTDEPIEAIAVYNVTPYKAAKYFNKVACFCFEKQILPPKKRVVMPVSFFIDPEIEKDPQMDEI
KTFTLSYTFFRYAEYSGGWLK
>Mature_180_residues
SGGKRRILLLVLLPVFMLLLSFASVPLYSLFCKATGYAGAVKRSKRSFDLPIGSRDIVVRFNADVTKNLPVRFSVQDYPV
VVKPGQNALIFYAVENTTDEPIEAIAVYNVTPYKAAKYFNKVACFCFEKQILPPKKRVVMPVSFFIDPEIEKDPQMDEIK
TFTLSYTFFRYAEYSGGWLK

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=174, Percent_Identity=43.1034482758621, Blast_Score=150, Evalue=5e-37,
Organism=Homo sapiens, GI242247057, Length=123, Percent_Identity=38.2113821138211, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI242247061, Length=123, Percent_Identity=38.2113821138211, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990692, Length=163, Percent_Identity=41.7177914110429, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6325125, Length=168, Percent_Identity=41.6666666666667, Blast_Score=132, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24581944, Length=163, Percent_Identity=45.398773006135, Blast_Score=154, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 20592; Mature: 20461

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGKRRILLLVLLPVFMLLLSFASVPLYSLFCKATGYAGAVKRSKRSFDLPIGSRDIVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEE
RFNADVTKNLPVRFSVQDYPVVVKPGQNALIFYAVENTTDEPIEAIAVYNVTPYKAAKYF
EECCCCCCCCCEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHH
NKVACFCFEKQILPPKKRVVMPVSFFIDPEIEKDPQMDEIKTFTLSYTFFRYAEYSGGWL
HHHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCC
K
C
>Mature Secondary Structure 
SGGKRRILLLVLLPVFMLLLSFASVPLYSLFCKATGYAGAVKRSKRSFDLPIGSRDIVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEE
RFNADVTKNLPVRFSVQDYPVVVKPGQNALIFYAVENTTDEPIEAIAVYNVTPYKAAKYF
EECCCCCCCCCEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHH
NKVACFCFEKQILPPKKRVVMPVSFFIDPEIEKDPQMDEIKTFTLSYTFFRYAEYSGGWL
HHHHHEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA