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The map label for this gene is yhcQ [C]

Identifier: 88607877

GI number: 88607877

Start: 407478

End: 408506

Strand: Direct

Name: yhcQ [C]

Synonym: APH_0394

Alternate gene names: 88607877

Gene position: 407478-408506 (Clockwise)

Preceding gene: 88607350

Following gene: 88607603

Centisome position: 27.7

GC content: 44.51

Gene sequence:

>1029_bases
GTGGGCTGTGTGTTATGGTTTACTAGCGGTATATTAATTAGCAGGAAGACATCTCAGGGCCCTATTTTTGATGGCAGAGC
TGATATTTGTTCTCTTATCGATGTATTAGAGTTCGATGCTGCGGTGCATGAGGTCAAGAGAGTTTTCTCTGCTAATGTGG
CCGCTGCGCGTGCTGTTGATATTATCTCTGAAGCCGATGGAAGGGTTGAAGAGGTGCTGCTTAGTAATGGGAGTGCTGTT
GATAAAGATCAAGTTATCTTAAGAATAGATGCCAGGGGTAAGTTAGAGCGGTTAGAGCAAGCTAGGGTACTGCTTGAGCA
AAGGCGACTTGAGCGTGGTGTTTCGGAGTCTCTGGGCGCTGAGGGGTATAGGTCTCAAGTTCATGATCATGCTGCGCTTG
TTGCGTTGAGAGAGGCGGAGGTTAATTATAAGAACGCGAAGTTGGCACTTGATAGCGCTACAGTAAAGGCGCCGTTTGCG
GGTATTGTGGATGAGATTTTGCCTCAAGTCGGATCTATGGTTAGTGTTGGGCAGACTGTTGCTAGGGTTTTGAATTTTGA
TAACCTCAAAGTGGTAACGTATGTCCCTGAAAGGGATGTGGCGTATATTAAACCAGGTGATAGCGTTAAGGTGAAGCTGG
GGCGTACTGGTGTTGTATCGTCGGGTAAAGTGAGCTTCGTTAGTAAGGTGGTTTCGCCTGAGACTAAGTCATATAAATTG
GAGATTATAATAGAGCCTCAGGGTGTTTTTGAGATTACTGAGGGTATGTTTGCTCAGGTTGAATTCGTTATTAGGAGAGA
GAAGGCTTGTCGAATACCTTCTTCCTCTCTTAGTGTAAGTGCTAAGGGTAATCTTGGTGTTAAAGTGCTGGATGATAGGG
GGATAATTAGGGTTCTGGATGTCTCAATAGTAGATGATGACGAGGGATATATATGGGTTTCTGGTATTCATGAAGATTCG
GTAAAGTTAATTGTACGGGGCCATGAATATGCGTTGGATGGTGCGCAAATAGTTGAATGTAATGCTTAA

Upstream 100 bases:

>100_bases
TATTTAGAGATGCATGCGAGGTTGTGTCTCATAAGCGCTAGAGGTTGAGGTGGGTCCATTTACACTGCGTAGGAGATATG
CAGTTGCGGCACTGTTAGTT

Downstream 100 bases:

>100_bases
TGGGGAATTTGAAACTAATTGCAATGGATACATGTATATCTTACAATGACGGCCATGTTGGTTTTTCTGGTTGAGAGTTG
AAAGTTAAGGAGGGAGTTGC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; Efflux System Protein; HlyD Family Secretion Protein; Periplasmic Component Of Efflux System; Auxiliary Transport Protein MFP Family; Periplasmic Linker Protein; Membrane-Fusion Protein AcrA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MGCVLWFTSGILISRKTSQGPIFDGRADICSLIDVLEFDAAVHEVKRVFSANVAAARAVDIISEADGRVEEVLLSNGSAV
DKDQVILRIDARGKLERLEQARVLLEQRRLERGVSESLGAEGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFA
GIVDEILPQVGSMVSVGQTVARVLNFDNLKVVTYVPERDVAYIKPGDSVKVKLGRTGVVSSGKVSFVSKVVSPETKSYKL
EIIIEPQGVFEITEGMFAQVEFVIRREKACRIPSSSLSVSAKGNLGVKVLDDRGIIRVLDVSIVDDDEGYIWVSGIHEDS
VKLIVRGHEYALDGAQIVECNA

Sequences:

>Translated_342_residues
MGCVLWFTSGILISRKTSQGPIFDGRADICSLIDVLEFDAAVHEVKRVFSANVAAARAVDIISEADGRVEEVLLSNGSAV
DKDQVILRIDARGKLERLEQARVLLEQRRLERGVSESLGAEGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFA
GIVDEILPQVGSMVSVGQTVARVLNFDNLKVVTYVPERDVAYIKPGDSVKVKLGRTGVVSSGKVSFVSKVVSPETKSYKL
EIIIEPQGVFEITEGMFAQVEFVIRREKACRIPSSSLSVSAKGNLGVKVLDDRGIIRVLDVSIVDDDEGYIWVSGIHEDS
VKLIVRGHEYALDGAQIVECNA
>Mature_341_residues
GCVLWFTSGILISRKTSQGPIFDGRADICSLIDVLEFDAAVHEVKRVFSANVAAARAVDIISEADGRVEEVLLSNGSAVD
KDQVILRIDARGKLERLEQARVLLEQRRLERGVSESLGAEGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFAG
IVDEILPQVGSMVSVGQTVARVLNFDNLKVVTYVPERDVAYIKPGDSVKVKLGRTGVVSSGKVSFVSKVVSPETKSYKLE
IIIEPQGVFEITEGMFAQVEFVIRREKACRIPSSSLSVSAKGNLGVKVLDDRGIIRVLDVSIVDDDEGYIWVSGIHEDSV
KLIVRGHEYALDGAQIVECNA

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37205; Mature: 37074

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCVLWFTSGILISRKTSQGPIFDGRADICSLIDVLEFDAAVHEVKRVFSANVAAARAVD
CCEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IISEADGRVEEVLLSNGSAVDKDQVILRIDARGKLERLEQARVLLEQRRLERGVSESLGA
HHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCC
EGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFAGIVDEILPQVGSMVSVGQTV
CHHHHHHHHHHHHEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHH
ARVLNFDNLKVVTYVPERDVAYIKPGDSVKVKLGRTGVVSSGKVSFVSKVVSPETKSYKL
HHHHCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEE
EIIIEPQGVFEITEGMFAQVEFVIRREKACRIPSSSLSVSAKGNLGVKVLDDRGIIRVLD
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCEEEEEE
VSIVDDDEGYIWVSGIHEDSVKLIVRGHEYALDGAQIVECNA
EEEEECCCCEEEEEECCCCCEEEEEECCEEECCCCEEEEECC
>Mature Secondary Structure 
GCVLWFTSGILISRKTSQGPIFDGRADICSLIDVLEFDAAVHEVKRVFSANVAAARAVD
CEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IISEADGRVEEVLLSNGSAVDKDQVILRIDARGKLERLEQARVLLEQRRLERGVSESLGA
HHHCCCCHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCC
EGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFAGIVDEILPQVGSMVSVGQTV
CHHHHHHHHHHHHEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHH
ARVLNFDNLKVVTYVPERDVAYIKPGDSVKVKLGRTGVVSSGKVSFVSKVVSPETKSYKL
HHHHCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEE
EIIIEPQGVFEITEGMFAQVEFVIRREKACRIPSSSLSVSAKGNLGVKVLDDRGIIRVLD
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCEEEEEE
VSIVDDDEGYIWVSGIHEDSVKLIVRGHEYALDGAQIVECNA
EEEEECCCCEEEEEECCCCCEEEEEECCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA