| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607837
Identifier: 88607837
GI number: 88607837
Start: 177157
End: 178125
Strand: Direct
Name: 88607837
Synonym: APH_0177
Alternate gene names: NA
Gene position: 177157-178125 (Clockwise)
Preceding gene: 88607272
Following gene: 88607266
Centisome position: 12.04
GC content: 44.48
Gene sequence:
>969_bases ATGGCTAGAAGAGGAACATGTACTATAACTTCCGGGAAGAAAACTCCGAAGGTACAAGAAGAAGTAGTCGGGCGTTTTAA CATCGGACATGAGGTAGATCGTGAGTTTAAGGAAAAACCGATCTCATTTTCGGAACGTACGACTTCGGTTAGGGCAAGGA TTGCCAAAATGGCGCAATCAGCGGCCCAAGGTGTTGCTAAGGTACCTGAACGTGCATCAAAAGCAGCAACATCTGTAGGT GATGGTATTGGGAAAGCTGCAAGGACAACTAAGGATGGTGTAACTCGAGCAGCGAGATCCGTATCTCAAGGTATTAATGC TAAAGTGGTAGAACCTGTATCAAAAGCAGCAACATCTGTAGGTGATGGTATTGGGAAAGCTGCAAGGACAACTAAGGATG GTGTAACTCGAGCAGCGAGATCCGTATCTCAAGGTATTAATGCTAAAGTGGTAGAACCTGTATCAAAAGCAGCAACATCT GTAGGTGATGGTATTGGGAGAGCTGCAAGGGCAACTAAAGATGGTGTAACTAAGGCATCCAGATCTGCAGGGAAAGGTAT TGATAAAGTTCCAGCACGTGCATCAAAAGCAGCAACATCTGTAGGTGATGGTATTGGGAAAGCTGCAAGGGCAACTAAAG ATGGTGTAACTAAGGCATCCAGATCCGCAGGTAGAGGTATTGCTAAAGTCCCTGAGCATGTTACAGAAGCAGTGCAAAAA ACACTATTCCCATCCTCAGTTGGAACCGGTGTTCTGCATACCACTAAAGAGCTCTCTGCAACGCATTTGAAATACTCTCC ATTGCACGGATTAGAGTCTAATGCTGTTAAGCTGGTAAGTGTGACAAAGAAAGGTGCTGAAAGCCTAAGTAATGAGTTAT ATGCTACTGGTAATACAGCAAGCAGACATACCCAAAGATTGTCTGCACAACAAGAGAGTGCTTCAAAGAAAGTAGGGCGT GCTAAATAA
Upstream 100 bases:
>100_bases TTTTCTGAAATAGTAGGTTATATCATAATACATAGAGTTAGATTTTAACTGTAAATTAACACTTTAGTCATCATATTAAT ATTTTAACATTATTAATTAT
Downstream 100 bases:
>100_bases TTCCTTTCCCAAAGTTCTATAAGAAATAAAATTTCGGGGAGGGAAAGAATATTCTTTTCCTGAAAAAGGTAGGTCAATTA AGCTGAATAGTGGTTTGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MARRGTCTITSGKKTPKVQEEVVGRFNIGHEVDREFKEKPISFSERTTSVRARIAKMAQSAAQGVAKVPERASKAATSVG DGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSVGDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATS VGDGIGRAARATKDGVTKASRSAGKGIDKVPARASKAATSVGDGIGKAARATKDGVTKASRSAGRGIAKVPEHVTEAVQK TLFPSSVGTGVLHTTKELSATHLKYSPLHGLESNAVKLVSVTKKGAESLSNELYATGNTASRHTQRLSAQQESASKKVGR AK
Sequences:
>Translated_322_residues MARRGTCTITSGKKTPKVQEEVVGRFNIGHEVDREFKEKPISFSERTTSVRARIAKMAQSAAQGVAKVPERASKAATSVG DGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSVGDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATS VGDGIGRAARATKDGVTKASRSAGKGIDKVPARASKAATSVGDGIGKAARATKDGVTKASRSAGRGIAKVPEHVTEAVQK TLFPSSVGTGVLHTTKELSATHLKYSPLHGLESNAVKLVSVTKKGAESLSNELYATGNTASRHTQRLSAQQESASKKVGR AK >Mature_321_residues ARRGTCTITSGKKTPKVQEEVVGRFNIGHEVDREFKEKPISFSERTTSVRARIAKMAQSAAQGVAKVPERASKAATSVGD GIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSVGDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSV GDGIGRAARATKDGVTKASRSAGKGIDKVPARASKAATSVGDGIGKAARATKDGVTKASRSAGRGIAKVPEHVTEAVQKT LFPSSVGTGVLHTTKELSATHLKYSPLHGLESNAVKLVSVTKKGAESLSNELYATGNTASRHTQRLSAQQESASKKVGRA K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33119; Mature: 32988
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRGTCTITSGKKTPKVQEEVVGRFNIGHEVDREFKEKPISFSERTTSVRARIAKMAQS CCCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AAQGVAKVPERASKAATSVGDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSVGDGIGRAARATKDGVTKAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAGKGIDKVPARASKAATSVGDGIGKAARATKDGVTKASRSAGRGIAKVPEHVTEAVQK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TLFPSSVGTGVLHTTKELSATHLKYSPLHGLESNAVKLVSVTKKGAESLSNELYATGNTA HHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCEEECCCCH SRHTQRLSAQQESASKKVGRAK HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARRGTCTITSGKKTPKVQEEVVGRFNIGHEVDREFKEKPISFSERTTSVRARIAKMAQS CCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AAQGVAKVPERASKAATSVGDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GDGIGKAARTTKDGVTRAARSVSQGINAKVVEPVSKAATSVGDGIGRAARATKDGVTKAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSAGKGIDKVPARASKAATSVGDGIGKAARATKDGVTKASRSAGRGIAKVPEHVTEAVQK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TLFPSSVGTGVLHTTKELSATHLKYSPLHGLESNAVKLVSVTKKGAESLSNELYATGNTA HHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCEEECCCCH SRHTQRLSAQQESASKKVGRAK HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA