Click here to switch to the map view.

The map label for this gene is 88607827

Identifier: 88607827

GI number: 88607827

Start: 429456

End: 429617

Strand: Reverse

Name: 88607827

Synonym: APH_0414

Alternate gene names: NA

Gene position: 429617-429456 (Counterclockwise)

Preceding gene: 88606719

Following gene: 88606767

Centisome position: 29.2

GC content: 39.51

Gene sequence:

>162_bases
TTGCTGCACTTAGTGCTTACCTCACTTATTCTTGACCCTGTAGTATATATTGTTCCAGCCTTAGAGCTTAAAATAGTAGT
ATTGGTGTTGTACAATCTAAGCCAGAAGATCGCATTTCTCCCATGCATACGTTATGCACCTATGGCCTTACAAAAGCAGT
AA

Upstream 100 bases:

>100_bases
CCCAACACTGCTAATTGCCACAATCGAGAAACCCACTGTCGCATTATATCCGTTCCATCTGTAAATCCTAGCACGAATAG
TAAAGAATGAAAAATTTCCA

Downstream 100 bases:

>100_bases
CAGCATCTCCTCTATCTCCACACTCATAGCCGCACTTCTAGCATCCACATCCTGCCTCTCTATGACAATTTTGTACTATA
AGCTCACCAAGCAACCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MLHLVLTSLILDPVVYIVPALELKIVVLVLYNLSQKIAFLPCIRYAPMALQKQ

Sequences:

>Translated_53_residues
MLHLVLTSLILDPVVYIVPALELKIVVLVLYNLSQKIAFLPCIRYAPMALQKQ
>Mature_53_residues
MLHLVLTSLILDPVVYIVPALELKIVVLVLYNLSQKIAFLPCIRYAPMALQKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6007; Mature: 6007

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLVLTSLILDPVVYIVPALELKIVVLVLYNLSQKIAFLPCIRYAPMALQKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MLHLVLTSLILDPVVYIVPALELKIVVLVLYNLSQKIAFLPCIRYAPMALQKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA