Click here to switch to the map view.

The map label for this gene is 88607786

Identifier: 88607786

GI number: 88607786

Start: 310998

End: 311345

Strand: Reverse

Name: 88607786

Synonym: APH_0327

Alternate gene names: NA

Gene position: 311345-310998 (Counterclockwise)

Preceding gene: 88607231

Following gene: 88607744

Centisome position: 21.16

GC content: 39.66

Gene sequence:

>348_bases
GTGAGTAGCTGTTTTGGGTATCTACCGAGTAAGGTACTAGGTGCAATAACTGCTACACAAATTTTTTCTTATATTGATGA
TCCGAAAGTTGCTGTTTTGGAAAATATCGAAAGTGGTGATTTTTCAGGATTAACTGCGTGGTTAAGTCCCCGTTCCCTTT
TTTCAGCATTCTTTCTCGTTATAGCGTCTGAATATCAAGCACTTAGCTCATACACTTGTGCAGATCTCGCGTCTAGATCT
TTAGAAGTCGATGCTCTAGCAGTTTCTCCAGTTACAGCTTTACTAGTAGTGGTCTTTCTGATTAGCACAGGTTTTTCAAC
CACATCTGTAGAATTTACCGCTTCTTGA

Upstream 100 bases:

>100_bases
ATATCTGCACCACATAAACCCCTACGAATGTGATATTGGAAACAAAGCCTCACTATTTCTGCTACCAGCTCCATAAAATA
AAGAGCAAGACGATTACTGG

Downstream 100 bases:

>100_bases
AGGCACTCCTTTTGAGAATATTTTGTAGCCGTAAGCTCTACCTTCCTAGAGCTTACAGCAAGATTCGTAGTGCCCTGAGC
ATATTGCCCTTCTGTAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSSCFGYLPSKVLGAITATQIFSYIDDPKVAVLENIESGDFSGLTAWLSPRSLFSAFFLVIASEYQALSSYTCADLASRS
LEVDALAVSPVTALLVVVFLISTGFSTTSVEFTAS

Sequences:

>Translated_115_residues
MSSCFGYLPSKVLGAITATQIFSYIDDPKVAVLENIESGDFSGLTAWLSPRSLFSAFFLVIASEYQALSSYTCADLASRS
LEVDALAVSPVTALLVVVFLISTGFSTTSVEFTAS
>Mature_114_residues
SSCFGYLPSKVLGAITATQIFSYIDDPKVAVLENIESGDFSGLTAWLSPRSLFSAFFLVIASEYQALSSYTCADLASRSL
EVDALAVSPVTALLVVVFLISTGFSTTSVEFTAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12195; Mature: 12064

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSCFGYLPSKVLGAITATQIFSYIDDPKVAVLENIESGDFSGLTAWLSPRSLFSAFFLV
CCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHH
IASEYQALSSYTCADLASRSLEVDALAVSPVTALLVVVFLISTGFSTTSVEFTAS
HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
SSCFGYLPSKVLGAITATQIFSYIDDPKVAVLENIESGDFSGLTAWLSPRSLFSAFFLV
CCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHH
IASEYQALSSYTCADLASRSLEVDALAVSPVTALLVVVFLISTGFSTTSVEFTAS
HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA