Definition | Anaplasma phagocytophilum HZ, complete genome. |
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Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is 88607231
Identifier: 88607231
GI number: 88607231
Start: 311724
End: 312671
Strand: Reverse
Name: 88607231
Synonym: APH_0328
Alternate gene names: NA
Gene position: 312671-311724 (Counterclockwise)
Preceding gene: 88607928
Following gene: 88607786
Centisome position: 21.25
GC content: 43.14
Gene sequence:
>948_bases ATGAAAAGAATTACATGCTGGGTGCTCAAGATTGCTGTAGTGGTTTCTGCACTATTTCTTGTACTGAGAGTGGTTTCCGT ATTTCTCACAGAGAATGAAGCGCGCTATACTGCCGATAAGCCTTATTCCCTTAGTGTGGAGAACTCAAATAGCCTTGGGT ACCGGATAGGCGTTTCATTAATACGTCCAATATTAGAAGCACGAATAGACCAGTACATCAAAGATCAAGGCCTTGAGGAC TACTTCAAGAGTTTGACACTTAAGTTACCACCGAAAGTCAGCTTCTCTTTCAATGATGTGCAAGAAGGCCAAGGATCCTC AGTAGTGTGCGGTCAAATGGTCACTGCGATGGTGGTACAATCGTCAGCCTCGGATCGGGAGAAAATTGGTACCTTATCTC AAACGGAGTTAGCGGAAAGAGTTAAGAACAGTGTATTACATCTCAACTTTCAGCTTGGAACACATGAAGTGCCTGCACTT AATCAAGGTATGATTGGCATGCGTGCTGATGGTAGTCGAGTGGTAACTCTTAACAATGATGGAGATGCTCTTAGCTACTA TGTTAATTTAACATCAATAGACTCCTCAGAGCCTTCTGCAAGCGCTTTAGAGCGTTTCATGGTTTTTGATAAGGTGAGAA CAGATTACGACTATAAGGAACCGATCACTGTGTCACGATGTGGAGATAAGGTATCGGTGGTGTATAATGTTAGGGATGCC TCTGGTAACGTTCTGTATGAGAACCTAAAGGCAAAATTCACTGTGGGTGCACGACAAGTACCTATAGCATTGGATTTAGC TGCGGTAGACCTGCAATCTGACAGTATGAGGTCTGTTATAGTTCCTCCTGATCTTTTAGCCGGATTAAGCATGGATGCAG ACTTTGACAACTCTACCATAAAAATCTTAGAGCTGTGGATGGATAGCGATCCTGAGGAAAACACATAG
Upstream 100 bases:
>100_bases AGACTATTTGTTACATCAAAGCGAGGAGTATCTAGAAAGAATTGATGAAGATACCGCAGTGTTGAAGGAACTTGTTGCGT TTATAAGAAATTTGTGACTT
Downstream 100 bases:
>100_bases ATCGATGATTCACTAGGTGAAAAGAACTTAGGCGTATAGTATATTCTGTAGTTTGCGGTTTTAGGAGTATCTGCTTTCGC GCACCTTGAGCATTTTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKRITCWVLKIAVVVSALFLVLRVVSVFLTENEARYTADKPYSLSVENSNSLGYRIGVSLIRPILEARIDQYIKDQGLED YFKSLTLKLPPKVSFSFNDVQEGQGSSVVCGQMVTAMVVQSSASDREKIGTLSQTELAERVKNSVLHLNFQLGTHEVPAL NQGMIGMRADGSRVVTLNNDGDALSYYVNLTSIDSSEPSASALERFMVFDKVRTDYDYKEPITVSRCGDKVSVVYNVRDA SGNVLYENLKAKFTVGARQVPIALDLAAVDLQSDSMRSVIVPPDLLAGLSMDADFDNSTIKILELWMDSDPEENT
Sequences:
>Translated_315_residues MKRITCWVLKIAVVVSALFLVLRVVSVFLTENEARYTADKPYSLSVENSNSLGYRIGVSLIRPILEARIDQYIKDQGLED YFKSLTLKLPPKVSFSFNDVQEGQGSSVVCGQMVTAMVVQSSASDREKIGTLSQTELAERVKNSVLHLNFQLGTHEVPAL NQGMIGMRADGSRVVTLNNDGDALSYYVNLTSIDSSEPSASALERFMVFDKVRTDYDYKEPITVSRCGDKVSVVYNVRDA SGNVLYENLKAKFTVGARQVPIALDLAAVDLQSDSMRSVIVPPDLLAGLSMDADFDNSTIKILELWMDSDPEENT >Mature_315_residues MKRITCWVLKIAVVVSALFLVLRVVSVFLTENEARYTADKPYSLSVENSNSLGYRIGVSLIRPILEARIDQYIKDQGLED YFKSLTLKLPPKVSFSFNDVQEGQGSSVVCGQMVTAMVVQSSASDREKIGTLSQTELAERVKNSVLHLNFQLGTHEVPAL NQGMIGMRADGSRVVTLNNDGDALSYYVNLTSIDSSEPSASALERFMVFDKVRTDYDYKEPITVSRCGDKVSVVYNVRDA SGNVLYENLKAKFTVGARQVPIALDLAAVDLQSDSMRSVIVPPDLLAGLSMDADFDNSTIKILELWMDSDPEENT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34786; Mature: 34786
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRITCWVLKIAVVVSALFLVLRVVSVFLTENEARYTADKPYSLSVENSNSLGYRIGVSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCHHHHHHH IRPILEARIDQYIKDQGLEDYFKSLTLKLPPKVSFSFNDVQEGQGSSVVCGQMVTAMVVQ HHHHHHHHHHHHHHHCCHHHHHHHCEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH SSASDREKIGTLSQTELAERVKNSVLHLNFQLGTHEVPALNQGMIGMRADGSRVVTLNND CCCCCHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCC GDALSYYVNLTSIDSSEPSASALERFMVFDKVRTDYDYKEPITVSRCGDKVSVVYNVRDA CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCEEEEEEEEECC SGNVLYENLKAKFTVGARQVPIALDLAAVDLQSDSMRSVIVPPDLLAGLSMDADFDNSTI CCCEEEECCCEEEEECCCCCCEEEEEEEEECCCCCCCEEECCHHHHHCCCCCCCCCCCEE KILELWMDSDPEENT EEEEEECCCCCCCCC >Mature Secondary Structure MKRITCWVLKIAVVVSALFLVLRVVSVFLTENEARYTADKPYSLSVENSNSLGYRIGVSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCHHHHHHH IRPILEARIDQYIKDQGLEDYFKSLTLKLPPKVSFSFNDVQEGQGSSVVCGQMVTAMVVQ HHHHHHHHHHHHHHHCCHHHHHHHCEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH SSASDREKIGTLSQTELAERVKNSVLHLNFQLGTHEVPALNQGMIGMRADGSRVVTLNND CCCCCHHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCC GDALSYYVNLTSIDSSEPSASALERFMVFDKVRTDYDYKEPITVSRCGDKVSVVYNVRDA CCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCEEEEEEEEECC SGNVLYENLKAKFTVGARQVPIALDLAAVDLQSDSMRSVIVPPDLLAGLSMDADFDNSTI CCCEEEECCCEEEEECCCCCCEEEEEEEEECCCCCCCEEECCHHHHHCCCCCCCCCCCEE KILELWMDSDPEENT EEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA