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The map label for this gene is 88607745

Identifier: 88607745

GI number: 88607745

Start: 370385

End: 373171

Strand: Direct

Name: 88607745

Synonym: APH_0375

Alternate gene names: NA

Gene position: 370385-373171 (Clockwise)

Preceding gene: 88607323

Following gene: 88607035

Centisome position: 25.17

GC content: 41.05

Gene sequence:

>2787_bases
GTGCCGAGGTTTGTTCCGATAATATTTATACTGTTGTTTATGCTTGCGGGATGTGGGTACCACGGCTGTATATCTCAGGC
CAATGTTTACGAGGATACTGTTAGAAGTGTGGTGTTTGCAAATTCTGGCGAGAAGGGACAGAAGGATAGCTCTAAATATT
GGACAAAAGTAGATTTTCCGTTATCTGGTAAGAAGCTGGATTTGCAAATAGAGCCCCATCACTTAGACTTTTGTGAAAAT
GCGCAAATAGACGTGATGGAATTGCGTGTTGCCAATAGTGACCCAATTACGATGGGTAAAAATAGGGAATTTAAATTTAC
CTTTCCTGTAGTGATTATGCCTGGTGAGGAGATTAGGTTTTTTCTCAATCCTGTTAATAATTTTACAATAGACGATGAAA
CATGTAGAAATGGGAAGGCTGATATTCGTGTATCAGACGTTGGCGCATGTTTATCCTCTGATATAGGGAATAAGTATCCT
CTGTATTTTAGCAGCAAGTTGGGGGGAGGATCAGGCTATTACAATAGTTGGTACAAAGTTGCTAAGGGAGAAGCGCCATA
TATAACAGATGGGATACCGGAGTACTTGCACATAAGTGGTGGTATTGTTAAGCCTAGCTCGATGGAAAAGCTTGACGATG
AGCATGAGAAACTGTTGTGTTTTAATCAAGCTGACTTAGAGGCGCATGTTGATAAGTTACTAAAGGATGAGAAAAACTCA
AGTCAAGACTCTAAGGAGGGGGCAAAGAATCCTGCGGCTGAAAAGGAAAAGCGTGATAAAAAGTTAGCAGAAGTTCGAGC
AAAGGTACGGGGGGTACGTGAGAAGTTTAAATCCTCGATGGATGCGTACTCTTTAAACGTGCATTGCAAGAAATTGTGTT
CTGGCATTATCGACAAGAGTCAAGGATGCGAAGGTTACCATAAGCTATTACAAGTGCAAGGAGAAGAGGAGAGGGATGTA
ATTCCATTTGTGAAGCTGAAGGGAAATTCTTTTGCTCTGAGTAAATTAGAGAAGAAAGAGTTACCTAAAGGTATGGAAAA
GGCTCAGGTTCCTAAGGAATTTGCGCGTGATTTTGAGGACTCAAAGCTAGAGCAGGCTAAGGCTACAGGTACGGCATTGG
GTCAGTCAGAGGAGTACTTGGTGCTAAATAGAGCGTATGAATATAAAACAGATGCTGCTGCTAGGGGATTTATTCTTAAA
TCGTCTTCGAAGAGGGCTGATGAAATCTCTCTCTTAGTTGAAGTTCCCAAGGAAGTTTCTGGTGATATTGCAGGCAGTTA
CACTCTTAGCGCAAAAAAAGATTGTAGCGCTCATATTGGAAAAAGCTTGTACTATGTGTTTTCCGAAGGCCCTCCTACCT
TCGAGCCGGGGCCTAACAACAAATCACGGCAAATAGATTTCATAGATACAGGGTCCGTTTTCATAGATGCTGTTGGTGAA
AAAGGGGATTTATACTTTGGTATCCACGATAATGGCGATGGATACGAAAACAATGTTGGGTATTTTGAAATCCATACAAA
AGCTACTAAGATACCTCCAAGGATATTCGGACATATTGTATCATGGACTGAAGGTAAGGTAAGAAGTGCGTTATATGGCT
CTTCTGACACAGATAGTGTTGCGCATAAATTATATCGTCACATCAGTCAAAGTGGTCCGTTTATGCGCATGGTAAATGCG
TTACTTGTTTTGTATGTAATAGTAAGCGCTCTGTATTTTTGTTTTGGTTTTTCTAAGGCATCGATATTTCAGCTTTTCAT
TACAATTGTGAAGATTATTACTGTAATGTACGTGCTGCGACCTGACAGTTGGACCTTCTTCAACGATCATCTGTTGAGCA
TTTTTATAGATGGACCAAAGTTTCTTATTGATGCAATGACCGGAGGAATAGGTTCGGGGGGAGATTTTGGATTCATGGAT
GGGATTCTATATAGGTTTAGCGTTACGCAAACCTGGATCCAGTTATTAGCGCTTATATTTGCAGGGCCTATAGGTTGGTT
ATCTGTAATCCTTATATTTTGGGGAATTATAGTCTTGATTCAGTTTTTGTTTCAGGCTGTGGTTATATATCTAGTGTCCA
TAATGACGATAGCTTTATTGCTCTGTATAGCGCCGTACTTTTTGATATGTGTGTTATTCAAACGCACAAAAAGCATATTT
GATATGTGGATAAAAGTTTTACTGCAGACTGCCATGCAGCCGGTTTTGATCTTTTCGTGTATTGCTCTGCTAGTGCATGC
AATTAACGAGGTAATATACGCAATGCTTAACTTTGAAGTTTGTGATACATGCGTTTTTAACATAGATCTAAAGCTTACCA
CGTTATGTTTGCTAAGTTTTCCGTTACCTATCGGTATTATTCCTATGATTCCTATCACTGATACTATAAGGGAAATACAT
AACACTGGAGAGGCGATGCTTATAGGGTTACCTGGACCGATATTTAACATTTTGATCTTCCTTGCTTTGGTCCACGTGGG
AAGGGATTTTGTGCTTAACAGTGGTGAGATGAGTAGCATTATGTTTGGAGCATTTACAAATCTTTCTGAAGTGGGTACGA
CAGCAGCGCAATCGTTATTGAGTGTTGTTGGTCTAGATAGGCAGACTGGGCAGATGTTGGAACAGCATCAGCATCAGTCA
GAGCTTTTCAGTAGAGGTCCTGGCGCTGGAAGACAAGAAGGTGCGTTTTCGGGTATGATGCGCGGCTTTGGAGGAGCGCA
TCAGGATTCAAGAGGCGTACGTCGTAGGCCTGTGATTCGTCCTGAAGATCCGCCAGCTAGCTTTTAA

Upstream 100 bases:

>100_bases
GAGTCAGTTGGTAGTTAATGGGGGCTTCGTAGTTTTGTCTGCGAGTACATTTCTAGCCGTAAGAAAGTGCGTGAGCTGAT
GTAGATAGAGAGCGTGTGCA

Downstream 100 bases:

>100_bases
GGAGTGCATCATATGCTGTCAAGGTCATTGCTCTTTATAGCGATAGTAGTGCTCTCAAGTTGTGGGGGGACATGTATTGA
GCCTGGAGCAGGGGTGAGTA

Product: VirB6 family type IV secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 928; Mature: 927

Protein sequence:

>928_residues
MPRFVPIIFILLFMLAGCGYHGCISQANVYEDTVRSVVFANSGEKGQKDSSKYWTKVDFPLSGKKLDLQIEPHHLDFCEN
AQIDVMELRVANSDPITMGKNREFKFTFPVVIMPGEEIRFFLNPVNNFTIDDETCRNGKADIRVSDVGACLSSDIGNKYP
LYFSSKLGGGSGYYNSWYKVAKGEAPYITDGIPEYLHISGGIVKPSSMEKLDDEHEKLLCFNQADLEAHVDKLLKDEKNS
SQDSKEGAKNPAAEKEKRDKKLAEVRAKVRGVREKFKSSMDAYSLNVHCKKLCSGIIDKSQGCEGYHKLLQVQGEEERDV
IPFVKLKGNSFALSKLEKKELPKGMEKAQVPKEFARDFEDSKLEQAKATGTALGQSEEYLVLNRAYEYKTDAAARGFILK
SSSKRADEISLLVEVPKEVSGDIAGSYTLSAKKDCSAHIGKSLYYVFSEGPPTFEPGPNNKSRQIDFIDTGSVFIDAVGE
KGDLYFGIHDNGDGYENNVGYFEIHTKATKIPPRIFGHIVSWTEGKVRSALYGSSDTDSVAHKLYRHISQSGPFMRMVNA
LLVLYVIVSALYFCFGFSKASIFQLFITIVKIITVMYVLRPDSWTFFNDHLLSIFIDGPKFLIDAMTGGIGSGGDFGFMD
GILYRFSVTQTWIQLLALIFAGPIGWLSVILIFWGIIVLIQFLFQAVVIYLVSIMTIALLLCIAPYFLICVLFKRTKSIF
DMWIKVLLQTAMQPVLIFSCIALLVHAINEVIYAMLNFEVCDTCVFNIDLKLTTLCLLSFPLPIGIIPMIPITDTIREIH
NTGEAMLIGLPGPIFNILIFLALVHVGRDFVLNSGEMSSIMFGAFTNLSEVGTTAAQSLLSVVGLDRQTGQMLEQHQHQS
ELFSRGPGAGRQEGAFSGMMRGFGGAHQDSRGVRRRPVIRPEDPPASF

Sequences:

>Translated_928_residues
MPRFVPIIFILLFMLAGCGYHGCISQANVYEDTVRSVVFANSGEKGQKDSSKYWTKVDFPLSGKKLDLQIEPHHLDFCEN
AQIDVMELRVANSDPITMGKNREFKFTFPVVIMPGEEIRFFLNPVNNFTIDDETCRNGKADIRVSDVGACLSSDIGNKYP
LYFSSKLGGGSGYYNSWYKVAKGEAPYITDGIPEYLHISGGIVKPSSMEKLDDEHEKLLCFNQADLEAHVDKLLKDEKNS
SQDSKEGAKNPAAEKEKRDKKLAEVRAKVRGVREKFKSSMDAYSLNVHCKKLCSGIIDKSQGCEGYHKLLQVQGEEERDV
IPFVKLKGNSFALSKLEKKELPKGMEKAQVPKEFARDFEDSKLEQAKATGTALGQSEEYLVLNRAYEYKTDAAARGFILK
SSSKRADEISLLVEVPKEVSGDIAGSYTLSAKKDCSAHIGKSLYYVFSEGPPTFEPGPNNKSRQIDFIDTGSVFIDAVGE
KGDLYFGIHDNGDGYENNVGYFEIHTKATKIPPRIFGHIVSWTEGKVRSALYGSSDTDSVAHKLYRHISQSGPFMRMVNA
LLVLYVIVSALYFCFGFSKASIFQLFITIVKIITVMYVLRPDSWTFFNDHLLSIFIDGPKFLIDAMTGGIGSGGDFGFMD
GILYRFSVTQTWIQLLALIFAGPIGWLSVILIFWGIIVLIQFLFQAVVIYLVSIMTIALLLCIAPYFLICVLFKRTKSIF
DMWIKVLLQTAMQPVLIFSCIALLVHAINEVIYAMLNFEVCDTCVFNIDLKLTTLCLLSFPLPIGIIPMIPITDTIREIH
NTGEAMLIGLPGPIFNILIFLALVHVGRDFVLNSGEMSSIMFGAFTNLSEVGTTAAQSLLSVVGLDRQTGQMLEQHQHQS
ELFSRGPGAGRQEGAFSGMMRGFGGAHQDSRGVRRRPVIRPEDPPASF
>Mature_927_residues
PRFVPIIFILLFMLAGCGYHGCISQANVYEDTVRSVVFANSGEKGQKDSSKYWTKVDFPLSGKKLDLQIEPHHLDFCENA
QIDVMELRVANSDPITMGKNREFKFTFPVVIMPGEEIRFFLNPVNNFTIDDETCRNGKADIRVSDVGACLSSDIGNKYPL
YFSSKLGGGSGYYNSWYKVAKGEAPYITDGIPEYLHISGGIVKPSSMEKLDDEHEKLLCFNQADLEAHVDKLLKDEKNSS
QDSKEGAKNPAAEKEKRDKKLAEVRAKVRGVREKFKSSMDAYSLNVHCKKLCSGIIDKSQGCEGYHKLLQVQGEEERDVI
PFVKLKGNSFALSKLEKKELPKGMEKAQVPKEFARDFEDSKLEQAKATGTALGQSEEYLVLNRAYEYKTDAAARGFILKS
SSKRADEISLLVEVPKEVSGDIAGSYTLSAKKDCSAHIGKSLYYVFSEGPPTFEPGPNNKSRQIDFIDTGSVFIDAVGEK
GDLYFGIHDNGDGYENNVGYFEIHTKATKIPPRIFGHIVSWTEGKVRSALYGSSDTDSVAHKLYRHISQSGPFMRMVNAL
LVLYVIVSALYFCFGFSKASIFQLFITIVKIITVMYVLRPDSWTFFNDHLLSIFIDGPKFLIDAMTGGIGSGGDFGFMDG
ILYRFSVTQTWIQLLALIFAGPIGWLSVILIFWGIIVLIQFLFQAVVIYLVSIMTIALLLCIAPYFLICVLFKRTKSIFD
MWIKVLLQTAMQPVLIFSCIALLVHAINEVIYAMLNFEVCDTCVFNIDLKLTTLCLLSFPLPIGIIPMIPITDTIREIHN
TGEAMLIGLPGPIFNILIFLALVHVGRDFVLNSGEMSSIMFGAFTNLSEVGTTAAQSLLSVVGLDRQTGQMLEQHQHQSE
LFSRGPGAGRQEGAFSGMMRGFGGAHQDSRGVRRRPVIRPEDPPASF

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 103238; Mature: 103106

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFVPIIFILLFMLAGCGYHGCISQANVYEDTVRSVVFANSGEKGQKDSSKYWTKVDFP
CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCC
LSGKKLDLQIEPHHLDFCENAQIDVMELRVANSDPITMGKNREFKFTFPVVIMPGEEIRF
CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCEEEEEEEEEECCCCEEE
FLNPVNNFTIDDETCRNGKADIRVSDVGACLSSDIGNKYPLYFSSKLGGGSGYYNSWYKV
EEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHH
AKGEAPYITDGIPEYLHISGGIVKPSSMEKLDDEHEKLLCFNQADLEAHVDKLLKDEKNS
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHEEEECCCHHHHHHHHHHHCCCCC
SQDSKEGAKNPAAEKEKRDKKLAEVRAKVRGVREKFKSSMDAYSLNVHCKKLCSGIIDKS
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCC
QGCEGYHKLLQVQGEEERDVIPFVKLKGNSFALSKLEKKELPKGMEKAQVPKEFARDFED
CCCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHCCCHHHHHCCCH
SKLEQAKATGTALGQSEEYLVLNRAYEYKTDAAARGFILKSSSKRADEISLLVEVPKEVS
HHHHHHHHHHHHCCCCCCEEEEECCHHCCCCHHHCCEEEECCCCCCHHHHHHHHCCHHHC
GDIAGSYTLSAKKDCSAHIGKSLYYVFSEGPPTFEPGPNNKSRQIDFIDTGSVFIDAVGE
CCCCCCEEECCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KGDLYFGIHDNGDGYENNVGYFEIHTKATKIPPRIFGHIVSWTEGKVRSALYGSSDTDSV
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHH
AHKLYRHISQSGPFMRMVNALLVLYVIVSALYFCFGFSKASIFQLFITIVKIITVMYVLR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDSWTFFNDHLLSIFIDGPKFLIDAMTGGIGSGGDFGFMDGILYRFSVTQTWIQLLALIF
CCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGPIGWLSVILIFWGIIVLIQFLFQAVVIYLVSIMTIALLLCIAPYFLICVLFKRTKSIF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMWIKVLLQTAMQPVLIFSCIALLVHAINEVIYAMLNFEVCDTCVFNIDLKLTTLCLLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHC
PLPIGIIPMIPITDTIREIHNTGEAMLIGLPGPIFNILIFLALVHVGRDFVLNSGEMSSI
CCCCCCEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCCHHHH
MFGAFTNLSEVGTTAAQSLLSVVGLDRQTGQMLEQHQHQSELFSRGPGAGRQEGAFSGMM
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RGFGGAHQDSRGVRRRPVIRPEDPPASF
HHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRFVPIIFILLFMLAGCGYHGCISQANVYEDTVRSVVFANSGEKGQKDSSKYWTKVDFP
CCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCC
LSGKKLDLQIEPHHLDFCENAQIDVMELRVANSDPITMGKNREFKFTFPVVIMPGEEIRF
CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCEEEEEEEEEECCCCEEE
FLNPVNNFTIDDETCRNGKADIRVSDVGACLSSDIGNKYPLYFSSKLGGGSGYYNSWYKV
EEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHH
AKGEAPYITDGIPEYLHISGGIVKPSSMEKLDDEHEKLLCFNQADLEAHVDKLLKDEKNS
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCHHHHEEEECCCHHHHHHHHHHHCCCCC
SQDSKEGAKNPAAEKEKRDKKLAEVRAKVRGVREKFKSSMDAYSLNVHCKKLCSGIIDKS
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCC
QGCEGYHKLLQVQGEEERDVIPFVKLKGNSFALSKLEKKELPKGMEKAQVPKEFARDFED
CCCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHCCCHHHHHCCCH
SKLEQAKATGTALGQSEEYLVLNRAYEYKTDAAARGFILKSSSKRADEISLLVEVPKEVS
HHHHHHHHHHHHCCCCCCEEEEECCHHCCCCHHHCCEEEECCCCCCHHHHHHHHCCHHHC
GDIAGSYTLSAKKDCSAHIGKSLYYVFSEGPPTFEPGPNNKSRQIDFIDTGSVFIDAVGE
CCCCCCEEECCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
KGDLYFGIHDNGDGYENNVGYFEIHTKATKIPPRIFGHIVSWTEGKVRSALYGSSDTDSV
CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHH
AHKLYRHISQSGPFMRMVNALLVLYVIVSALYFCFGFSKASIFQLFITIVKIITVMYVLR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDSWTFFNDHLLSIFIDGPKFLIDAMTGGIGSGGDFGFMDGILYRFSVTQTWIQLLALIF
CCCCEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGPIGWLSVILIFWGIIVLIQFLFQAVVIYLVSIMTIALLLCIAPYFLICVLFKRTKSIF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMWIKVLLQTAMQPVLIFSCIALLVHAINEVIYAMLNFEVCDTCVFNIDLKLTTLCLLSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHC
PLPIGIIPMIPITDTIREIHNTGEAMLIGLPGPIFNILIFLALVHVGRDFVLNSGEMSSI
CCCCCCEECCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHEECCCCHHHH
MFGAFTNLSEVGTTAAQSLLSVVGLDRQTGQMLEQHQHQSELFSRGPGAGRQEGAFSGMM
HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
RGFGGAHQDSRGVRRRPVIRPEDPPASF
HHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA