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The map label for this gene is virB9-1 [H]

Identifier: 88607651

GI number: 88607651

Start: 86392

End: 87207

Strand: Reverse

Name: virB9-1 [H]

Synonym: APH_0081

Alternate gene names: 88607651

Gene position: 87207-86392 (Counterclockwise)

Preceding gene: 88607434

Following gene: 88607814

Centisome position: 5.93

GC content: 44.0

Gene sequence:

>816_bases
ATGAGAAGTGCTTTACTGATTTTCGTTGTAGTGTTGCTCTACAGTTCGGCTGGACTTTCTAAACAAGAGCCACGTTCTAT
AGCGGCTGATGATCACATTAAGACCTTGAACTATAATCCCCAGTCTATTCACAAATACACCGGATTTTACGGGTATCAGT
CTAGTATCTTATTTGAGGCAGGGGAAACGATTTCCACAGTGTCTATGGGTGATTCAACAGGTTGGCAGCTTGTACCACAG
GGTAATAGGTTGTTTATCAAACCTGTCGCTGACAACGCAGATACAAACGTTACTATTCTGACCAATAGACGCGTTTATTA
TTTTGAGTTACACGCTGAAGAGGCTTCCGGGTTGGACGATCCTAGGCTGGCTTATGAAGTTCGCCTTGTATACCCTAGCT
TGGAGGGAAGTATCGGCGGCAACGTCTCTGCTGTTGGTGGAGATGTATTATTTCCATCGTACCAAACTGATGTACCGGAC
TTAAGGAATCCAGACGTCGCGAGGAAGGGGCTGAATTTTAATTACACTGTATCTCATACTCCGGGCTCAGAGGATATTGT
GCCCCTTAGGGTATTTGACGACGGTAAGTTTACGTATATGCAGTTTTCTGGCGTTAATGGTGATTTACCATCAGTCTTCA
ACGTAGATGCGCAAGGATATGAGTCCTTGATAAATTTTAGAATGGTCGGAGATTATGTGGTCATTGAACGTACATCTAGA
GCATTTACTCTACGGTACGGCTCTAGCACAGCTTGTATATTCAATGAGAAAAGGGCATTCCCTGTAGTGAAGGGTGCTGA
AAGACGCCGGAAATAA

Upstream 100 bases:

>100_bases
TAACGGAAGTGCTCTGTTGCGTAATTTTTCATACTAACTAGTTTCCAGACGGATACATTAGTGTTAGACTGCGGTGTGCG
AGTTTTGGATAAAGTGGTTT

Downstream 100 bases:

>100_bases
ATTGGAGGTTTTATGGCTCATGTGACTGAGATTGGTGATTCTGATTTCGCTGACAAGGTTGAGCGGAAGAGCGGTATAGT
GGTTGTTGACTTTTGGGCAC

Product: type IV secretion system protein VirB9

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MRSALLIFVVVLLYSSAGLSKQEPRSIAADDHIKTLNYNPQSIHKYTGFYGYQSSILFEAGETISTVSMGDSTGWQLVPQ
GNRLFIKPVADNADTNVTILTNRRVYYFELHAEEASGLDDPRLAYEVRLVYPSLEGSIGGNVSAVGGDVLFPSYQTDVPD
LRNPDVARKGLNFNYTVSHTPGSEDIVPLRVFDDGKFTYMQFSGVNGDLPSVFNVDAQGYESLINFRMVGDYVVIERTSR
AFTLRYGSSTACIFNEKRAFPVVKGAERRRK

Sequences:

>Translated_271_residues
MRSALLIFVVVLLYSSAGLSKQEPRSIAADDHIKTLNYNPQSIHKYTGFYGYQSSILFEAGETISTVSMGDSTGWQLVPQ
GNRLFIKPVADNADTNVTILTNRRVYYFELHAEEASGLDDPRLAYEVRLVYPSLEGSIGGNVSAVGGDVLFPSYQTDVPD
LRNPDVARKGLNFNYTVSHTPGSEDIVPLRVFDDGKFTYMQFSGVNGDLPSVFNVDAQGYESLINFRMVGDYVVIERTSR
AFTLRYGSSTACIFNEKRAFPVVKGAERRRK
>Mature_271_residues
MRSALLIFVVVLLYSSAGLSKQEPRSIAADDHIKTLNYNPQSIHKYTGFYGYQSSILFEAGETISTVSMGDSTGWQLVPQ
GNRLFIKPVADNADTNVTILTNRRVYYFELHAEEASGLDDPRLAYEVRLVYPSLEGSIGGNVSAVGGDVLFPSYQTDVPD
LRNPDVARKGLNFNYTVSHTPGSEDIVPLRVFDDGKFTYMQFSGVNGDLPSVFNVDAQGYESLINFRMVGDYVVIERTSR
AFTLRYGSSTACIFNEKRAFPVVKGAERRRK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 30129; Mature: 30129

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSALLIFVVVLLYSSAGLSKQEPRSIAADDHIKTLNYNPQSIHKYTGFYGYQSSILFEA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCEEEEEC
GETISTVSMGDSTGWQLVPQGNRLFIKPVADNADTNVTILTNRRVYYFELHAEEASGLDD
CCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEEECHHHCCCCC
PRLAYEVRLVYPSLEGSIGGNVSAVGGDVLFPSYQTDVPDLRNPDVARKGLNFNYTVSHT
CCEEEEEEEEEECCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCHHHHCCCEEEEEECC
PGSEDIVPLRVFDDGKFTYMQFSGVNGDLPSVFNVDAQGYESLINFRMVGDYVVIERTSR
CCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEECCCHHHHHHEEEEEECCEEEEEECCC
AFTLRYGSSTACIFNEKRAFPVVKGAERRRK
EEEEEECCCEEEEEECCCCCCEECCHHHHCC
>Mature Secondary Structure
MRSALLIFVVVLLYSSAGLSKQEPRSIAADDHIKTLNYNPQSIHKYTGFYGYQSSILFEA
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCEEEEEC
GETISTVSMGDSTGWQLVPQGNRLFIKPVADNADTNVTILTNRRVYYFELHAEEASGLDD
CCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCEEEEEECCEEEEEEEECHHHCCCCC
PRLAYEVRLVYPSLEGSIGGNVSAVGGDVLFPSYQTDVPDLRNPDVARKGLNFNYTVSHT
CCEEEEEEEEEECCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCHHHHCCCEEEEEECC
PGSEDIVPLRVFDDGKFTYMQFSGVNGDLPSVFNVDAQGYESLINFRMVGDYVVIERTSR
CCCCCEEEEEEEECCCEEEEEEECCCCCCCCEEECCCHHHHHHEEEEEECCEEEEEECCC
AFTLRYGSSTACIFNEKRAFPVVKGAERRRK
EEEEEECCCEEEEEECCCCCCEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]