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The map label for this gene is 88607552

Identifier: 88607552

GI number: 88607552

Start: 431977

End: 432117

Strand: Reverse

Name: 88607552

Synonym: APH_0418

Alternate gene names: NA

Gene position: 432117-431977 (Counterclockwise)

Preceding gene: 88606981

Following gene: 88606719

Centisome position: 29.37

GC content: 42.55

Gene sequence:

>141_bases
ATGCATAGGGTAGCAAGGGCATTGGTATTTTTGATGTTTCTTGTTGTTACAGTTCCTTTAACGTCATACGCGGCGGGCGA
TGCTACTGCTAGTACACCAACAGAGGAAGAAAACAACTTGGTGCATTATAGAAGGTTATAG

Upstream 100 bases:

>100_bases
TCAGGTAGGGCCGAGACCGTTGCCATACTTCGTGAAATTATGGAAGAAGTAGGGGATGATCCAAATGTGTGGTTGCCTAT
TTTTTATCAAAGGGTGAAAA

Downstream 100 bases:

>100_bases
TCCAAGAACTCATAACATAAGCTATCGCCCTCACCTAAGCCAATGCACCTAGATGGAACGGGGTCTCAGCCCATACCTTG
ATACTCAATAGCTACACAAA

Product: type IV secretion system protein VirB6,C-terminal truncation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MHRVARALVFLMFLVVTVPLTSYAAGDATASTPTEEENNLVHYRRL

Sequences:

>Translated_46_residues
MHRVARALVFLMFLVVTVPLTSYAAGDATASTPTEEENNLVHYRRL
>Mature_46_residues
MHRVARALVFLMFLVVTVPLTSYAAGDATASTPTEEENNLVHYRRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5162; Mature: 5162

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRVARALVFLMFLVVTVPLTSYAAGDATASTPTEEENNLVHYRRL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MHRVARALVFLMFLVVTVPLTSYAAGDATASTPTEEENNLVHYRRL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA