Definition Anaplasma phagocytophilum HZ, complete genome.
Accession NC_007797
Length 1,471,282

Click here to switch to the map view.

The map label for this gene is 88607531

Identifier: 88607531

GI number: 88607531

Start: 503209

End: 503325

Strand: Direct

Name: 88607531

Synonym: APH_0475

Alternate gene names: NA

Gene position: 503209-503325 (Clockwise)

Preceding gene: 88606838

Following gene: 88606968

Centisome position: 34.2

GC content: 45.3

Gene sequence:

>117_bases
GTGTCCTATGGTGGAGATATTGGGTGTATAGCTTTTGAAAAGATGTGCATGCGCTGGTATGTAGTAGTTTCAGGCGTATT
TTCTGGAGGGGATAGGCGTATGCTTGCACCTGTGTAA

Upstream 100 bases:

>100_bases
AAGCAGGTGGAAAAGTTTATAGATACTGATTCAAAGCTTGCGGGTGATATAAGTCTATTGATAAGGATGTTGAGGTAGGT
CGGCGTAACGACAGAAGTGT

Downstream 100 bases:

>100_bases
TGCCGTCTTTTTTGGCAGGCATAATGGCTTGTTATTTAGGTCTAGCAAATGTTGTTAGAGGTGAAGGTGGCAATGCATTG
CATGTAAGTAAAATTGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 37

Protein sequence:

>38_residues
MSYGGDIGCIAFEKMCMRWYVVVSGVFSGGDRRMLAPV

Sequences:

>Translated_38_residues
MSYGGDIGCIAFEKMCMRWYVVVSGVFSGGDRRMLAPV
>Mature_37_residues
SYGGDIGCIAFEKMCMRWYVVVSGVFSGGDRRMLAPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4190; Mature: 4059

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
10.5 %Met     (Translated Protein)
15.8 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
13.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGGDIGCIAFEKMCMRWYVVVSGVFSGGDRRMLAPV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
SYGGDIGCIAFEKMCMRWYVVVSGVFSGGDRRMLAPV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA