Click here to switch to the map view.

The map label for this gene is ygfA [C]

Identifier: 88607506

GI number: 88607506

Start: 715600

End: 716124

Strand: Reverse

Name: ygfA [C]

Synonym: APH_0693

Alternate gene names: 88607506

Gene position: 716124-715600 (Counterclockwise)

Preceding gene: 88606806

Following gene: 88607559

Centisome position: 48.67

GC content: 39.43

Gene sequence:

>525_bases
ATGGATCACTTAGAGGAAAAGGTGCGACTCCGAAAGGAATATAGAAAACTGAGAAAAGCTGTTACTACTGTTGCTGATGC
TGCGCAAATGTTATTGCAAAATACTATCAGCATATTAAGTTTCGGAAACCACGACATAGTCTCAGGGTATATTCCAATTG
ACGGAGAAATAGATGTTCTGCCTTTAATGAATTTTATAAGCAAGACATCGGTTGTTCTTGTACCTGAAGTGAAAAAAGAT
TCCAGAATGCTTACATTTAGGAGATGGTTCAGCGGTATTAATGAATTGGGCGAAGCGCTAAGCCCCAATATTCTTTTGAT
ACCTCTCGTAGCATTTGATAGACGTCTATACAGACTAGGATTTGGCGGTGGATACTACGATTATACGATAGAGCATTTGA
AAAGGAGAGGTCAATGCAAGTGCGTTGGCATTGCATATGACTTACAGCTTTGCGCGAATCTTCCAGTTTGCGAGCACGAC
CAAAAGTTAGACTTAGTTATAACCGAAAAAGGTATATATTCCTGA

Upstream 100 bases:

>100_bases
TATATCTTGGGCGTAATGCTATGGTAGCTCATTAGAAATAAGTGACAATACTAACAAGTGGTGTAGGATAAATAGTTGGG
AATAATTGAGCTTTTGTTCT

Downstream 100 bases:

>100_bases
TATTTTCCTGCTTACGTATACCTTGTATTAAGGTGTGACTGATGTTTCTTTTCACAGTAACACTCTATCTAGTACCTTAA
TAGAGAATCTGAAAAGAAGC

Product: 5-formyltetrahydrofolate cyclo-ligase family protein

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase Family Protein; 5 10-Methenyltetrahydrofolate Synthetase; 5-Formyltetrahydrofolate Cyclo- Ligase

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MDHLEEKVRLRKEYRKLRKAVTTVADAAQMLLQNTISILSFGNHDIVSGYIPIDGEIDVLPLMNFISKTSVVLVPEVKKD
SRMLTFRRWFSGINELGEALSPNILLIPLVAFDRRLYRLGFGGGYYDYTIEHLKRRGQCKCVGIAYDLQLCANLPVCEHD
QKLDLVITEKGIYS

Sequences:

>Translated_174_residues
MDHLEEKVRLRKEYRKLRKAVTTVADAAQMLLQNTISILSFGNHDIVSGYIPIDGEIDVLPLMNFISKTSVVLVPEVKKD
SRMLTFRRWFSGINELGEALSPNILLIPLVAFDRRLYRLGFGGGYYDYTIEHLKRRGQCKCVGIAYDLQLCANLPVCEHD
QKLDLVITEKGIYS
>Mature_174_residues
MDHLEEKVRLRKEYRKLRKAVTTVADAAQMLLQNTISILSFGNHDIVSGYIPIDGEIDVLPLMNFISKTSVVLVPEVKKD
SRMLTFRRWFSGINELGEALSPNILLIPLVAFDRRLYRLGFGGGYYDYTIEHLKRRGQCKCVGIAYDLQLCANLPVCEHD
QKLDLVITEKGIYS

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.3.2

Molecular weight: Translated: 19848; Mature: 19848

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHLEEKVRLRKEYRKLRKAVTTVADAAQMLLQNTISILSFGNHDIVSGYIPIDGEIDVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH
PLMNFISKTSVVLVPEVKKDSRMLTFRRWFSGINELGEALSPNILLIPLVAFDRRLYRLG
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCC
FGGGYYDYTIEHLKRRGQCKCVGIAYDLQLCANLPVCEHDQKLDLVITEKGIYS
CCCCHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MDHLEEKVRLRKEYRKLRKAVTTVADAAQMLLQNTISILSFGNHDIVSGYIPIDGEIDVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH
PLMNFISKTSVVLVPEVKKDSRMLTFRRWFSGINELGEALSPNILLIPLVAFDRRLYRLG
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCC
FGGGYYDYTIEHLKRRGQCKCVGIAYDLQLCANLPVCEHDQKLDLVITEKGIYS
CCCCHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA