Definition | Anaplasma phagocytophilum HZ, complete genome. |
---|---|
Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is 88607498
Identifier: 88607498
GI number: 88607498
Start: 1131652
End: 1133904
Strand: Reverse
Name: 88607498
Synonym: APH_1069
Alternate gene names: NA
Gene position: 1133904-1131652 (Counterclockwise)
Preceding gene: 88607945
Following gene: 88607400
Centisome position: 77.07
GC content: 42.21
Gene sequence:
>2253_bases ATGCTCTATAGAAAGACAAAAGACTTTTTTGAAGAGCGAAAAGGCTTTTTCGATAAAAATGACTTCAGTTATGGCCGCGA AAATTCTGGAAGCATTGTAGACAAGATATACGGACGAAGTATGGGTATAGATCAGCCCAAAAATCCAGAGATATTTCAAT GTTTGGTAGGGAATCAAACGAGATTTTGGTCTAGTGAGGATAAAGCTTTTTGTGTGCATTATCGTGAAAGTGCTCGGGGT TACGATATGTATTTGCACGTTTTTTATGGTGACAGTGCGATCTTATCGAAGGTCAACAGTGCTCCGTTTTCGGCAGAGCA TGTGGAACACTATGCGCCTGTTTACGCTGTTTTTGGATGTAATGCCGAATACAGGATTACTTTTGTTCATGTAGAGGATC AAGGTATTTCGCCTTGGGAAGCGTCTTCGCGTAGGGTCAATACCCTGGTTCTCAGTCAATATGTAATAGGGATTGATGGT AATAATTCCTTGCTTGTGGAGGGACGAAGTTACAGATTTGGAGCTGGAGCTGGTGAAGAGTATCGCGCTCCTTTAGCTGT ATTGCATGATGTAAGAGGAGACGTTCTTGTTACGGGGAAATCAAAAGGAGATAGTAGGCTATCTGCAACAGATCAGGGGT ATTTTTTATGGCGCTTTTCTGCTGCCACGCTTCAGCCGGTTGTTCGTAGAAATAAAATGTCGTCGGAAATACGGAGCTAC CTATTCCGTAGATTTGGTGGTAGTTCTCTTGAGAGACCAGAGCATTTGGTGCTGTGGGATCAACAAGGGAGTGATCGTCT AGCTTTGACCTATATAGGTAGTTACATCGCTGTCGAGGATCGTGAATATTATCACCCGTATAAGGCTTTTGACGCCGTTT TTTTTCGTAATAAAGCGACTGCGCGCCTTATGTCCTTGAGACAATGTCTGATAGGTACACATTTATGCAATATAGAGGCG CGAGGAGGAGTTGTACTGACTGCTAAAAAAATGAAACTTATTTATGGGAGGGCTATTGGTGATCTGAGGTACATTTTCTA TGTGACACGCAGCTTGGACACTTTGCGTATGGAGGAGCTTTCTGTAGCAATGCTAGGTGGAGGTACTTACACAGTACTCC AGGGTATTATACCAATGGGATTTTCTGCATCTTCTATTAATCTTAAAAGTGTGGATGGCATACATGTGGAGGTTATGCTT TTAGATACTGCTTCATTGCGCGCGAATGTGTATAGAATCGACCTAAGGCAATTAAATAGCAAAAAGGAGTGTCGTATAGA TGCTTTTTCCATAAATTATAGTAGTCTGGGTACACAGGAGATACTTGCAGTTATCAAAAGAGAGGTACACGAAGCGCTTA GCTCTGTGAAGGAATCTAGTGTTGTAATAATTGAAGATGTACTGGCTGTTGAGGGTCCTAACTTAGTTTATAATACTCCT AGAATGTATTATTTTAAGTCAAGCATTGTAAAGCATAGCCATGCTGGAGTGAGGGATTTTACGATAGGGGATCCTACGAA TTGGATTACAATGGGTAATAGGCAAGGTATTGAGGAAAAAACCACGCAAGTGCGTGATTTGGTGCCTATAGGTACTACAG GGGGTACGGGTAATCGTACTACAGTGCTCAGAGCTATAGAAGAAAGTCCTACTGTAGAGGTTTTGTCTTCTACAGATAGT GTGAATACACTTTTGGGTAAAAATGGGAGCATGGAGGTTGCGGCACTTAGCATGCAGGGTAACAACCATGCAAGCAGTAT AACTGATGGTGTAGAGGAGATAGACGCTAATTCAGTTGTGCATCATACTACGGTACATTATGGAGTAGAGAATTCTTCAA CTAATGGTTTGTTGAATTCTAGCGCAAATTCTGTAGATAACAGTTCGAGTATCAAGCGATATAATGAACAGGATGCATAT TTTGGTGTCACTGAGGGGATAATCGTCTTAGGGGCATTAGGTATAATCATTGCGCTGATAGTGGCTGTATATGCTATTGT TACGTATGTTAGGAGTCGGTCTACAGGTTATAATAGGGCAGATGTTGCAAGGAATACTCCAGAGAGTGGTCTTGCGGCGT CAAGTGAATATGTTGCCCTCGGTGATTATGGTGAACAAAGTGGTAGCGTGGGGCATTCTACTGTAGACGCTGCTGTCCCA CCTGAAACACACGGCTGCACCACGGTTGGTTGCGTTTTATGTAAAGAAGTAGAAGCCACTAGTATGTTTTGTCAGACTAC AAGTAAGCTTTAG
Upstream 100 bases:
>100_bases TGATAAGCAAAGGAGTGATACAGGGGATAGTAGTACGGAATATGATAGTGAAGGTAGCATTGAGTATGTTGCGGAAGAGT CTGAGCAGGATCAGGGGAGA
Downstream 100 bases:
>100_bases TCTACATTAATGTTTTTTACATACACTGCCGCTACGGGTTAAATTTTGTCTTGTAGGTTGATGTTGCGGTGTGTGTAGAT GGGTTTTATGGGCCTGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MLYRKTKDFFEERKGFFDKNDFSYGRENSGSIVDKIYGRSMGIDQPKNPEIFQCLVGNQTRFWSSEDKAFCVHYRESARG YDMYLHVFYGDSAILSKVNSAPFSAEHVEHYAPVYAVFGCNAEYRITFVHVEDQGISPWEASSRRVNTLVLSQYVIGIDG NNSLLVEGRSYRFGAGAGEEYRAPLAVLHDVRGDVLVTGKSKGDSRLSATDQGYFLWRFSAATLQPVVRRNKMSSEIRSY LFRRFGGSSLERPEHLVLWDQQGSDRLALTYIGSYIAVEDREYYHPYKAFDAVFFRNKATARLMSLRQCLIGTHLCNIEA RGGVVLTAKKMKLIYGRAIGDLRYIFYVTRSLDTLRMEELSVAMLGGGTYTVLQGIIPMGFSASSINLKSVDGIHVEVML LDTASLRANVYRIDLRQLNSKKECRIDAFSINYSSLGTQEILAVIKREVHEALSSVKESSVVIIEDVLAVEGPNLVYNTP RMYYFKSSIVKHSHAGVRDFTIGDPTNWITMGNRQGIEEKTTQVRDLVPIGTTGGTGNRTTVLRAIEESPTVEVLSSTDS VNTLLGKNGSMEVAALSMQGNNHASSITDGVEEIDANSVVHHTTVHYGVENSSTNGLLNSSANSVDNSSSIKRYNEQDAY FGVTEGIIVLGALGIIIALIVAVYAIVTYVRSRSTGYNRADVARNTPESGLAASSEYVALGDYGEQSGSVGHSTVDAAVP PETHGCTTVGCVLCKEVEATSMFCQTTSKL
Sequences:
>Translated_750_residues MLYRKTKDFFEERKGFFDKNDFSYGRENSGSIVDKIYGRSMGIDQPKNPEIFQCLVGNQTRFWSSEDKAFCVHYRESARG YDMYLHVFYGDSAILSKVNSAPFSAEHVEHYAPVYAVFGCNAEYRITFVHVEDQGISPWEASSRRVNTLVLSQYVIGIDG NNSLLVEGRSYRFGAGAGEEYRAPLAVLHDVRGDVLVTGKSKGDSRLSATDQGYFLWRFSAATLQPVVRRNKMSSEIRSY LFRRFGGSSLERPEHLVLWDQQGSDRLALTYIGSYIAVEDREYYHPYKAFDAVFFRNKATARLMSLRQCLIGTHLCNIEA RGGVVLTAKKMKLIYGRAIGDLRYIFYVTRSLDTLRMEELSVAMLGGGTYTVLQGIIPMGFSASSINLKSVDGIHVEVML LDTASLRANVYRIDLRQLNSKKECRIDAFSINYSSLGTQEILAVIKREVHEALSSVKESSVVIIEDVLAVEGPNLVYNTP RMYYFKSSIVKHSHAGVRDFTIGDPTNWITMGNRQGIEEKTTQVRDLVPIGTTGGTGNRTTVLRAIEESPTVEVLSSTDS VNTLLGKNGSMEVAALSMQGNNHASSITDGVEEIDANSVVHHTTVHYGVENSSTNGLLNSSANSVDNSSSIKRYNEQDAY FGVTEGIIVLGALGIIIALIVAVYAIVTYVRSRSTGYNRADVARNTPESGLAASSEYVALGDYGEQSGSVGHSTVDAAVP PETHGCTTVGCVLCKEVEATSMFCQTTSKL >Mature_750_residues MLYRKTKDFFEERKGFFDKNDFSYGRENSGSIVDKIYGRSMGIDQPKNPEIFQCLVGNQTRFWSSEDKAFCVHYRESARG YDMYLHVFYGDSAILSKVNSAPFSAEHVEHYAPVYAVFGCNAEYRITFVHVEDQGISPWEASSRRVNTLVLSQYVIGIDG NNSLLVEGRSYRFGAGAGEEYRAPLAVLHDVRGDVLVTGKSKGDSRLSATDQGYFLWRFSAATLQPVVRRNKMSSEIRSY LFRRFGGSSLERPEHLVLWDQQGSDRLALTYIGSYIAVEDREYYHPYKAFDAVFFRNKATARLMSLRQCLIGTHLCNIEA RGGVVLTAKKMKLIYGRAIGDLRYIFYVTRSLDTLRMEELSVAMLGGGTYTVLQGIIPMGFSASSINLKSVDGIHVEVML LDTASLRANVYRIDLRQLNSKKECRIDAFSINYSSLGTQEILAVIKREVHEALSSVKESSVVIIEDVLAVEGPNLVYNTP RMYYFKSSIVKHSHAGVRDFTIGDPTNWITMGNRQGIEEKTTQVRDLVPIGTTGGTGNRTTVLRAIEESPTVEVLSSTDS VNTLLGKNGSMEVAALSMQGNNHASSITDGVEEIDANSVVHHTTVHYGVENSSTNGLLNSSANSVDNSSSIKRYNEQDAY FGVTEGIIVLGALGIIIALIVAVYAIVTYVRSRSTGYNRADVARNTPESGLAASSEYVALGDYGEQSGSVGHSTVDAAVP PETHGCTTVGCVLCKEVEATSMFCQTTSKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82764; Mature: 82764
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRKTKDFFEERKGFFDKNDFSYGRENSGSIVDKIYGRSMGIDQPKNPEIFQCLVGNQT CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCE RFWSSEDKAFCVHYRESARGYDMYLHVFYGDSAILSKVNSAPFSAEHVEHYAPVYAVFGC EECCCCCCEEEEEEECCCCCEEEEEEEEECCHHHHHHHCCCCCCHHHHHHHCCEEEEEEC NAEYRITFVHVEDQGISPWEASSRRVNTLVLSQYVIGIDGNNSLLVEGRSYRFGAGAGEE CCEEEEEEEEEECCCCCCCCCCCCHHHEEEEEEEEEEECCCCEEEEECCCEEECCCCCHH YRAPLAVLHDVRGDVLVTGKSKGDSRLSATDQGYFLWRFSAATLQPVVRRNKMSSEIRSY HCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH LFRRFGGSSLERPEHLVLWDQQGSDRLALTYIGSYIAVEDREYYHPYKAFDAVFFRNKAT HHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCHHH ARLMSLRQCLIGTHLCNIEARGGVVLTAKKMKLIYGRAIGDLRYIFYVTRSLDTLRMEEL HHHHHHHHHHHHHHEEEEECCCCEEEEEEHEEEEHHHHHHHHEEEEEEECCCCHHHHHHE SVAMLGGGTYTVLQGIIPMGFSASSINLKSVDGIHVEVMLLDTASLRANVYRIDLRQLNS EEEEECCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEHHHCCC KKECRIDAFSINYSSLGTQEILAVIKREVHEALSSVKESSVVIIEDVLAVEGPNLVYNTP CCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEECC RMYYFKSSIVKHSHAGVRDFTIGDPTNWITMGNRQGIEEKTTQVRDLVPIGTTGGTGNRT EEEEEHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCEEECCCCCCCCCE TVLRAIEESPTVEVLSSTDSVNTLLGKNGSMEVAALSMQGNNHASSITDGVEEIDANSVV EEEEECCCCCCEEEEECCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEE HHTTVHYGVENSSTNGLLNSSANSVDNSSSIKRYNEQDAYFGVTEGIIVLGALGIIIALI EEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHH VAVYAIVTYVRSRSTGYNRADVARNTPESGLAASSEYVALGDYGEQSGSVGHSTVDAAVP HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCC PETHGCTTVGCVLCKEVEATSMFCQTTSKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLYRKTKDFFEERKGFFDKNDFSYGRENSGSIVDKIYGRSMGIDQPKNPEIFQCLVGNQT CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCE RFWSSEDKAFCVHYRESARGYDMYLHVFYGDSAILSKVNSAPFSAEHVEHYAPVYAVFGC EECCCCCCEEEEEEECCCCCEEEEEEEEECCHHHHHHHCCCCCCHHHHHHHCCEEEEEEC NAEYRITFVHVEDQGISPWEASSRRVNTLVLSQYVIGIDGNNSLLVEGRSYRFGAGAGEE CCEEEEEEEEEECCCCCCCCCCCCHHHEEEEEEEEEEECCCCEEEEECCCEEECCCCCHH YRAPLAVLHDVRGDVLVTGKSKGDSRLSATDQGYFLWRFSAATLQPVVRRNKMSSEIRSY HCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH LFRRFGGSSLERPEHLVLWDQQGSDRLALTYIGSYIAVEDREYYHPYKAFDAVFFRNKAT HHHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCHHH ARLMSLRQCLIGTHLCNIEARGGVVLTAKKMKLIYGRAIGDLRYIFYVTRSLDTLRMEEL HHHHHHHHHHHHHHEEEEECCCCEEEEEEHEEEEHHHHHHHHEEEEEEECCCCHHHHHHE SVAMLGGGTYTVLQGIIPMGFSASSINLKSVDGIHVEVMLLDTASLRANVYRIDLRQLNS EEEEECCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEEEHHHCCC KKECRIDAFSINYSSLGTQEILAVIKREVHEALSSVKESSVVIIEDVLAVEGPNLVYNTP CCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCEEEECC RMYYFKSSIVKHSHAGVRDFTIGDPTNWITMGNRQGIEEKTTQVRDLVPIGTTGGTGNRT EEEEEHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCEEECCCCCCCCCE TVLRAIEESPTVEVLSSTDSVNTLLGKNGSMEVAALSMQGNNHASSITDGVEEIDANSVV EEEEECCCCCCEEEEECCCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEE HHTTVHYGVENSSTNGLLNSSANSVDNSSSIKRYNEQDAYFGVTEGIIVLGALGIIIALI EEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHH VAVYAIVTYVRSRSTGYNRADVARNTPESGLAASSEYVALGDYGEQSGSVGHSTVDAAVP HHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCC PETHGCTTVGCVLCKEVEATSMFCQTTSKL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA