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The map label for this gene is 88607404

Identifier: 88607404

GI number: 88607404

Start: 260665

End: 261519

Strand: Direct

Name: 88607404

Synonym: APH_0260

Alternate gene names: NA

Gene position: 260665-261519 (Clockwise)

Preceding gene: 88607264

Following gene: 88606843

Centisome position: 17.72

GC content: 42.57

Gene sequence:

>855_bases
GTGCGCAATATAGTTAGCAAGAAATTGTTTTGTTTGTGCGGTTACAAAGCTACAGTGCTTATGGTGTTGTTGACCGTTGT
ATTGGGTATATACTGCTGGAATAGTGACTTTTCCTACCTCGCAATACTACTCTCTGGTTTATGGGTTCTATTACTAGTGA
CGGTAATGCCGAGTTGCTTTTTTACCAATGGTCCCAATGATGCTAAGGTTGTAGAGTTTTTCGGGGAGTATATAGGGACT
ACGTCGAAGACAGGGTTGCTGTTTTCCATTCCATATGCTTCAAGAAGGAATATTTCCCTCAAGGTAGAAAGCACGAATAC
TTCGGTGATGAAAGTTAACGATGCAGAGGGCAATCCTATCGAGATCGCAGCAGCAGTTGTTTGGAGAGTAATATCGCCTG
AGAAGGTGTGCTTCAATATAGAAAATTATCAAGGTTTTATATCTATTCAAGGGGAGACGGCTCTCAGAGAACTGGCAGGT
AGCTATCCGTACGATTCAAGTAGCGGGATATCGCTCCGACAAAATTTTCCTGAGATTTCTCGAGAACTCAAGGTGATGCT
GCAGAATAGAATGGGTATAGTGGGCATAGCCATAGAGGATGCTCGTATATCACATTTGGCTTACGCTTCGGAAATTGCAC
AGGTTATGTTGCGTAGACAACAAGCCCGTGCCATCTCAGAGGCTAGAGGACACATAGTAAAGAATGCAGTGGGAATGGTG
GATTCTGTATTGCTCCATCTGGAACAGAAGCACCAAATAAGTTTATCAGATGAGCAGAAGATCAAGTTTGTTAGTAACTT
ACTTGTCGCGTTAGTGTCGGATAGTGATACGCAACCTGTAATAAATGTAGAATGA

Upstream 100 bases:

>100_bases
TTTGTTTTGGTAGGGAATTAGTCAACATAGTATACGTTTTCGATAAGCTATTCAATAACCAGGTATGTACCCAATGGACG
CTGAACGTGGAACTGGATCT

Downstream 100 bases:

>100_bases
ATATCCAAGTAGTGTGAATGATACGTCGGGTATCATGTTCAAAAAAGAGCAATTATAGTTGCGTTTTATGTGCCCCTATC
TACAGGTAACACTGTGCAGC

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRNIVSKKLFCLCGYKATVLMVLLTVVLGIYCWNSDFSYLAILLSGLWVLLLVTVMPSCFFTNGPNDAKVVEFFGEYIGT
TSKTGLLFSIPYASRRNISLKVESTNTSVMKVNDAEGNPIEIAAAVVWRVISPEKVCFNIENYQGFISIQGETALRELAG
SYPYDSSSGISLRQNFPEISRELKVMLQNRMGIVGIAIEDARISHLAYASEIAQVMLRRQQARAISEARGHIVKNAVGMV
DSVLLHLEQKHQISLSDEQKIKFVSNLLVALVSDSDTQPVINVE

Sequences:

>Translated_284_residues
MRNIVSKKLFCLCGYKATVLMVLLTVVLGIYCWNSDFSYLAILLSGLWVLLLVTVMPSCFFTNGPNDAKVVEFFGEYIGT
TSKTGLLFSIPYASRRNISLKVESTNTSVMKVNDAEGNPIEIAAAVVWRVISPEKVCFNIENYQGFISIQGETALRELAG
SYPYDSSSGISLRQNFPEISRELKVMLQNRMGIVGIAIEDARISHLAYASEIAQVMLRRQQARAISEARGHIVKNAVGMV
DSVLLHLEQKHQISLSDEQKIKFVSNLLVALVSDSDTQPVINVE
>Mature_284_residues
MRNIVSKKLFCLCGYKATVLMVLLTVVLGIYCWNSDFSYLAILLSGLWVLLLVTVMPSCFFTNGPNDAKVVEFFGEYIGT
TSKTGLLFSIPYASRRNISLKVESTNTSVMKVNDAEGNPIEIAAAVVWRVISPEKVCFNIENYQGFISIQGETALRELAG
SYPYDSSSGISLRQNFPEISRELKVMLQNRMGIVGIAIEDARISHLAYASEIAQVMLRRQQARAISEARGHIVKNAVGMV
DSVLLHLEQKHQISLSDEQKIKFVSNLLVALVSDSDTQPVINVE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31474; Mature: 31474

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIVSKKLFCLCGYKATVLMVLLTVVLGIYCWNSDFSYLAILLSGLWVLLLVTVMPSCF
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE
FTNGPNDAKVVEFFGEYIGTTSKTGLLFSIPYASRRNISLKVESTNTSVMKVNDAEGNPI
ECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCH
EIAAAVVWRVISPEKVCFNIENYQGFISIQGETALRELAGSYPYDSSSGISLRQNFPEIS
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
RELKVMLQNRMGIVGIAIEDARISHLAYASEIAQVMLRRQQARAISEARGHIVKNAVGMV
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSVLLHLEQKHQISLSDEQKIKFVSNLLVALVSDSDTQPVINVE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MRNIVSKKLFCLCGYKATVLMVLLTVVLGIYCWNSDFSYLAILLSGLWVLLLVTVMPSCF
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHE
FTNGPNDAKVVEFFGEYIGTTSKTGLLFSIPYASRRNISLKVESTNTSVMKVNDAEGNPI
ECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCH
EIAAAVVWRVISPEKVCFNIENYQGFISIQGETALRELAGSYPYDSSSGISLRQNFPEIS
HHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
RELKVMLQNRMGIVGIAIEDARISHLAYASEIAQVMLRRQQARAISEARGHIVKNAVGMV
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSVLLHLEQKHQISLSDEQKIKFVSNLLVALVSDSDTQPVINVE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA