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The map label for this gene is 88607264

Identifier: 88607264

GI number: 88607264

Start: 259843

End: 260562

Strand: Direct

Name: 88607264

Synonym: APH_0259

Alternate gene names: NA

Gene position: 259843-260562 (Clockwise)

Preceding gene: 88607146

Following gene: 88607404

Centisome position: 17.66

GC content: 42.36

Gene sequence:

>720_bases
ATGATTCCTGTAAATTTGTCGAAATATGTCAATTTCGCTAGTACTGTTTCCTCTAAGTCGCACATAGAGAATGAAGATGA
TCAAGAAAGCTCTGATAAGGGGGAAGAAGACGGTGTTGATAGTGGTGCAGAAGAAGATGCAGCTAAAGTAAGCACGGATC
CTGGAGATGGATCGTTAAGCGGTGCAACCGATGCAGAACCAGAGAAAAAAGTAGTTTTGGAAGAGCAGAGGGAGGACACT
CAAAACTATAAGAGATGGAAGATTAGACGTCCGGCGAATCCCTTAACTGAGTCTACAGGCCAAGATCTGGAGAACTCTCA
TATGCCTAGTTACCAGAGCGTGATGGATCTATACCAAAATGCTTTTAGTTGTGCAGGTGCTAATGATGTTACAGGGTTAC
GTGCGATTCTGCATGAGATTACGTCCTATGGCAAAAGTAAGGCATTCTTGCTGGAAGAACTACGCACAATTGAAAAGGAT
AATCTGCTGCTTTATGCAGTGAAGCATGATGCTGTAGATGCAGTGAGATATCTCTTATGGGAGGGTTCGGATTACAATGT
CACGGACAAGAATGGGGAGACCCCATTACATATTGCAGTTTCGAGTGGAAATATGGAAATGATAAACCTAATTTCTGAAA
TGCAGCGTGGGATTAACTTAGAAGCAGAAAAGGGTGAAACAACAGACGATGTGGAGCTGTACACATCTTCTAATAAGTAA

Upstream 100 bases:

>100_bases
GCATAAAGAAGATGGAGTACGTGTTGTCTCTGCAGGTATTGCACGTACAGGTGGTACGCTATTTTATGATATAGCAGGAG
AATATGGATACAGTGTAAGT

Downstream 100 bases:

>100_bases
TTTTTGTTTTGGTAGGGAATTAGTCAACATAGTATACGTTTTCGATAAGCTATTCAATAACCAGGTATGTACCCAATGGA
CGCTGAACGTGGAACTGGAT

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: Ankyrin; Ankyrin Repeat Domain Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIPVNLSKYVNFASTVSSKSHIENEDDQESSDKGEEDGVDSGAEEDAAKVSTDPGDGSLSGATDAEPEKKVVLEEQREDT
QNYKRWKIRRPANPLTESTGQDLENSHMPSYQSVMDLYQNAFSCAGANDVTGLRAILHEITSYGKSKAFLLEELRTIEKD
NLLLYAVKHDAVDAVRYLLWEGSDYNVTDKNGETPLHIAVSSGNMEMINLISEMQRGINLEAEKGETTDDVELYTSSNK

Sequences:

>Translated_239_residues
MIPVNLSKYVNFASTVSSKSHIENEDDQESSDKGEEDGVDSGAEEDAAKVSTDPGDGSLSGATDAEPEKKVVLEEQREDT
QNYKRWKIRRPANPLTESTGQDLENSHMPSYQSVMDLYQNAFSCAGANDVTGLRAILHEITSYGKSKAFLLEELRTIEKD
NLLLYAVKHDAVDAVRYLLWEGSDYNVTDKNGETPLHIAVSSGNMEMINLISEMQRGINLEAEKGETTDDVELYTSSNK
>Mature_239_residues
MIPVNLSKYVNFASTVSSKSHIENEDDQESSDKGEEDGVDSGAEEDAAKVSTDPGDGSLSGATDAEPEKKVVLEEQREDT
QNYKRWKIRRPANPLTESTGQDLENSHMPSYQSVMDLYQNAFSCAGANDVTGLRAILHEITSYGKSKAFLLEELRTIEKD
NLLLYAVKHDAVDAVRYLLWEGSDYNVTDKNGETPLHIAVSSGNMEMINLISEMQRGINLEAEKGETTDDVELYTSSNK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26447; Mature: 26447

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVNLSKYVNFASTVSSKSHIENEDDQESSDKGEEDGVDSGAEEDAAKVSTDPGDGSLS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
GATDAEPEKKVVLEEQREDTQNYKRWKIRRPANPLTESTGQDLENSHMPSYQSVMDLYQN
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCHHCCCCCHHHHHHHHHH
AFSCAGANDVTGLRAILHEITSYGKSKAFLLEELRTIEKDNLLLYAVKHDAVDAVRYLLW
HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
EGSDYNVTDKNGETPLHIAVSSGNMEMINLISEMQRGINLEAEKGETTDDVELYTSSNK
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MIPVNLSKYVNFASTVSSKSHIENEDDQESSDKGEEDGVDSGAEEDAAKVSTDPGDGSLS
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
GATDAEPEKKVVLEEQREDTQNYKRWKIRRPANPLTESTGQDLENSHMPSYQSVMDLYQN
CCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCHHCCCCCHHHHHHHHHH
AFSCAGANDVTGLRAILHEITSYGKSKAFLLEELRTIEKDNLLLYAVKHDAVDAVRYLLW
HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
EGSDYNVTDKNGETPLHIAVSSGNMEMINLISEMQRGINLEAEKGETTDDVELYTSSNK
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA